The interplay between structure and function in intrinsically unstructured proteins

被引:564
作者
Tompa, P [1 ]
机构
[1] Hungarian Acad Sci, Biol Res Ctr, Inst Enzymol, H-1518 Budapest, Hungary
基金
英国惠康基金;
关键词
natively unfolded protein; intrinsically disordered protein; protein disorder in vivo; functional classification; residual structure;
D O I
10.1016/j.febslet.2005.03.072
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Intrinsically unstructured proteins (IUPs) are common in various proteomes and occupy a unique structural and functional niche in which function is directly linked to structural disorder. The evidence that these proteins exist without a well-defined folded structure in vitro is compelling, and justifies considering them a separate class within the protein world. In this paper, novel advances in the rapidly advancing field of IUPs are reviewed, with the major attention directed to the evidence of their unfolded character in vivo, the interplay of their residual structure and their various functional modes and the functional benefits their malleable structural state provides. Via all these details, it is demonstrated that in only a couple of years after its conception, the idea of protein disorder has already come of age and transformed our basic concepts of protein structure and function. (c) 2005 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:3346 / 3354
页数:9
相关论文
共 83 条
[21]   Intrinsic disorder and protein function [J].
Dunker, AK ;
Brown, CJ ;
Lawson, JD ;
Iakoucheva, LM ;
Obradovic, Z .
BIOCHEMISTRY, 2002, 41 (21) :6573-6582
[22]   Intrinsically disordered protein [J].
Dunker, AK ;
Lawson, JD ;
Brown, CJ ;
Williams, RM ;
Romero, P ;
Oh, JS ;
Oldfield, CJ ;
Campen, AM ;
Ratliff, CR ;
Hipps, KW ;
Ausio, J ;
Nissen, MS ;
Reeves, R ;
Kang, CH ;
Kissinger, CR ;
Bailey, RW ;
Griswold, MD ;
Chiu, M ;
Garner, EC ;
Obradovic, Z .
JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 2001, 19 (01) :26-59
[23]   Unfolded proteins and protein folding studied by NMR [J].
Dyson, HJ ;
Wright, PE .
CHEMICAL REVIEWS, 2004, 104 (08) :3607-3622
[24]   Intrinsically unstructured proteins and their functions [J].
Dyson, HJ ;
Wright, PE .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2005, 6 (03) :197-208
[25]   Structure of factor-inhibiting hypoxia-inducible factor (HIF) reveals mechanism of oxidative modification of HIF-1α [J].
Elkins, JM ;
Hewitson, KS ;
McNeill, LA ;
Seibel, JF ;
Schlemminger, I ;
Pugh, CW ;
Ratcliffe, PJ ;
Schofield, CJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (03) :1802-1806
[26]   Macromolecular crowding: obvious but underappreciated [J].
Ellis, RJ .
TRENDS IN BIOCHEMICAL SCIENCES, 2001, 26 (10) :597-604
[27]   Endocytosis and vesicle trafficking [J].
Evans, PR ;
Owen, DJ .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2002, 12 (06) :814-821
[28]   Structure of an mRNA capping enzyme bound to the phosphorylated carboxy-terminal domain of RNA polymerase II [J].
Fabrega, C ;
Shen, V ;
Shuman, S ;
Lima, CD .
MOLECULAR CELL, 2003, 11 (06) :1549-1561
[29]   Natively unfolded proteins [J].
Fink, AL .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2005, 15 (01) :35-41
[30]   Effects of macromolecular crowding on the intrinsically disordered proteins c-Fos and p27Kip1 [J].
Flaugh, SL ;
Lumb, KJ .
BIOMACROMOLECULES, 2001, 2 (02) :538-540