Coarse-grained models and collective phenomena in membranes:: Computer simulation of membrane fusion

被引:73
作者
Müller, M
Katsov, K
Schick, M
机构
[1] Johannes Gutenberg Univ Mainz, Inst Phys, D-55099 Mainz, Germany
[2] Univ Washington, Dept Phys, Seattle, WA 98195 USA
关键词
computer modeling; membranes; supramolecular structures; biological applications of polymers; amphiphiles; self-assembly;
D O I
10.1002/polb.10456
中图分类号
O63 [高分子化学(高聚物)];
学科分类号
070305 ; 080501 ; 081704 ;
摘要
We discuss the role coarse-grained models play in investigating collective phenomena in bilayer membranes and place them in the context of alternative approaches. By reducing the degrees of freedom and applying simple effective potentials, coarse-grained models can address the large time scales and length scales of collective phenomena in membranes. Although the mapping from a coarse-grained model onto chemically realistic models is a challenge, such models provide a direct view on the phenomena that occur on the length scales of a few tens of nanometers. Their relevance is exemplified by the study of fusion of model membranes. (C) 2003 Wiley Periodicals, Inc.
引用
收藏
页码:1441 / 1450
页数:10
相关论文
共 76 条
[41]   Measured effects of diacylglycerol on structural and elastic properties of phospholipid membranes [J].
Leikin, S ;
Kozlov, MM ;
Fuller, NL ;
Rand, RP .
BIOPHYSICAL JOURNAL, 1996, 71 (05) :2623-2632
[42]   Protein machines and lipid assemblies: current views of cell membrane fusion [J].
Lentz, BR ;
Malinin, V ;
Haque, ME ;
Evans, K .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2000, 10 (05) :607-615
[43]   Transbilayer lipid redistribution accompanies poly(ethylene glycol) treatment of model membranes but is not induced by fusion [J].
Lentz, BR ;
Talbot, W ;
Lee, JK ;
Zheng, LX .
BIOCHEMISTRY, 1997, 36 (08) :2076-2083
[44]   Distribution of lipids in nonlamellar phases of their mixtures [J].
Li, XJ ;
Schick, M .
JOURNAL OF CHEMICAL PHYSICS, 2000, 112 (13) :6063-6072
[45]   Mesoscopic undulations and thickness fluctuations in lipid bilayers from molecular dynamics simulations [J].
Lindahl, E ;
Edholm, O .
BIOPHYSICAL JOURNAL, 2000, 79 (01) :426-433
[46]   Self-assembly of a phospholipid Langmuir monolayer using coarse-grained molecular dynamics simulations [J].
Lopez, CF ;
Nielsen, SO ;
Moore, PB ;
Shelley, JC ;
Klein, ML .
JOURNAL OF PHYSICS-CONDENSED MATTER, 2002, 14 (40) :9431-9444
[47]  
MARKIN VS, 1983, BIOFIZIKA+, V28, P72
[48]   Membrane fusion: Stalk model revisited [J].
Markin, VS ;
Albanesi, JP .
BIOPHYSICAL JOURNAL, 2002, 82 (02) :693-712
[49]   Effect of undulations on surface tension in simulated bilayers [J].
Marrink, SJ ;
Mark, AE .
JOURNAL OF PHYSICAL CHEMISTRY B, 2001, 105 (26) :6122-6127
[50]   PHASE-BEHAVIOR OF BLOCK-COPOLYMER HOMOPOLYMER BLENDS [J].
MATSEN, MW .
MACROMOLECULES, 1995, 28 (17) :5765-5773