Selectivity of Kinase Inhibitor Fragments

被引:58
作者
Bamborough, Paul [1 ]
Brown, Murray J. [1 ]
Christopher, John A. [1 ]
Chung, Chun-wa [1 ]
Mellor, Geoff W. [1 ]
机构
[1] GlaxoSmithKline R&D, Med Res Ctr, Stevenage SG1 2NY, Herts, England
关键词
X-RAY CRYSTALLOGRAPHY; P38 MAP KINASE; DRUG DISCOVERY; LEAD DISCOVERY; TARGET IMMOBILIZATION; LIGAND SPECIFICITY; TYROSINE KINASES; IKK2; INHIBITORS; LIBRARY DESIGN; POTENT;
D O I
10.1021/jm200349b
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
A kinase-focused screening set of fragments has been assembled and has proved successful for the discovery of ligand-efficient hits against many targets. Here we present some of our general conclusions from this exercise. Notably, we present the first profiling results for literature fragments that have previously been used as starting points for optimization against individual kinases. We consider the importance of screening format and the extent to which selectivity is helpful in selecting fragments for progression. Results are also outlined for fragments targeting the DFG-out conformation and for atypical kinases such as PM and lipid kinases.
引用
收藏
页码:5131 / 5143
页数:13
相关论文
共 89 条
[61]  
MEDINA JR, 2010, ACS MED CHEM LETT, V20, P2552
[62]   3,5-Disubstituted-indole-7-carboxamides: The discovery of a novel series of potent, selective inhibitors of IKK-β [J].
Miller, David D. ;
Bamborough, Paul ;
Christopher, John A. ;
Baldwin, Ian R. ;
Champigny, Aurelie C. ;
Cutler, Geoffrey J. ;
Kerns, Jeffrey K. ;
Longstaff, Timothy ;
Mellor, Geoffrey W. ;
Morey, James V. ;
Morse, Mary A. ;
Nie, Hong ;
Rumsey, William L. ;
Taggart, John J. .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2011, 21 (08) :2255-2258
[63]  
NADIN A, UNPUB
[64]   Genetic and Pharmacological Inhibition of PDK1 in Cancer Cells CHARACTERIZATION OF A SELECTIVE ALLOSTERIC KINASE INHIBITOR [J].
Nagashima, Kumiko ;
Shumway, Stuart D. ;
Sathyanarayanan, Sriram ;
Chen, Albert H. ;
Dolinski, Brian ;
Xu, Youyuan ;
Keilhack, Heike ;
Thi Nguyen ;
Wiznerowicz, Maciej ;
Li, Lixia ;
Lutterbach, Bart A. ;
Chi, An ;
Paweletz, Cloud ;
Allison, Timothy ;
Yan, Youwei ;
Munshi, Sanjeev K. ;
Klippel, Anke ;
Kraus, Manfred ;
Bobkova, Ekaterina V. ;
Deshmukh, Sujal ;
Xu, Zangwei ;
Mueller, Uwe ;
Szewczak, Alexander A. ;
Pan, Bo-Sheng ;
Richon, Victoria ;
Pollock, Roy ;
Blume-Jensen, Peter ;
Northrup, Alan ;
Andersen, Jannik N. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2011, 286 (08) :6433-6448
[65]   Discovering novel ligands for macromolecules using X-ray crystallographic screening [J].
Nienaber, VL ;
Richardson, PL ;
Klighofer, V ;
Bouska, JJ ;
Giranda, VL ;
Greer, J .
NATURE BIOTECHNOLOGY, 2000, 18 (10) :1105-1108
[66]   Inhibition of p38 MAP kinase by utilizing a novel allosteric binding site [J].
Pargellis, C ;
Tong, L ;
Churchill, L ;
Cirillo, PF ;
Gilmore, T ;
Graham, AG ;
Grob, PM ;
Hickey, ER ;
Moss, N ;
Pav, S ;
Regan, J .
NATURE STRUCTURAL BIOLOGY, 2002, 9 (04) :268-272
[67]   Discovery of 3,5-disubstituted-1H-pyrrolo[2,3-b]pyridines as potent inhibitors of the insulin-like growth factor-1 receptor (IGF-1R) tyrosine kinase [J].
Patnaik, Samarjit ;
Stevens, Kirk L. ;
Gerding, Roseanne ;
Deanda, Felix ;
Shotwell, J. Brad ;
Tang, Jun ;
Hamajima, Toshihiro ;
Nakamura, Hiroko ;
Leesnitzer, M. Anthony ;
Hassell, Anne M. ;
Shewchuck, Lisa M. ;
Kumar, Rakesh ;
Lei, Huangshu ;
Chamberlain, Stanley D. .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2009, 19 (11) :3136-3140
[68]   Fragment-Based Screening Using Surface Plasmon Resonance Technology [J].
Perspicace, Samantha ;
Banner, David ;
Benz, Joerg ;
Mueller, Francis ;
Schlatter, Daniel ;
Huber, Walter .
JOURNAL OF BIOMOLECULAR SCREENING, 2009, 14 (04) :337-349
[69]   Structural analysis identifies imidazo[1,2-b]Pyridazines as PIM kinase inhibitors with In vitro antileukemic activity [J].
Pogacic, Vanda ;
Bullock, Alex N. ;
Fedorov, Oleg ;
Filippakopoulos, Panagis ;
Gasser, Christelle ;
Biondi, Andrea ;
Meyer-Monard, Sandrine ;
Knapp, Stefan ;
Schwaller, Juerg .
CANCER RESEARCH, 2007, 67 (14) :6916-6924
[70]   Trends in Kinase Selectivity Insights for Target Class-Focused Library Screening [J].
Posy, Shana L. ;
Hermsmeier, Mark A. ;
Vaccaro, Wayne ;
Ott, Karl-Heinz ;
Todderud, Gordon ;
Lippy, Jonathan S. ;
Trainor, George L. ;
Loughney, Deborah A. ;
Johnson, Stephen R. .
JOURNAL OF MEDICINAL CHEMISTRY, 2011, 54 (01) :54-66