Selectivity of Kinase Inhibitor Fragments

被引:58
作者
Bamborough, Paul [1 ]
Brown, Murray J. [1 ]
Christopher, John A. [1 ]
Chung, Chun-wa [1 ]
Mellor, Geoff W. [1 ]
机构
[1] GlaxoSmithKline R&D, Med Res Ctr, Stevenage SG1 2NY, Herts, England
关键词
X-RAY CRYSTALLOGRAPHY; P38 MAP KINASE; DRUG DISCOVERY; LEAD DISCOVERY; TARGET IMMOBILIZATION; LIGAND SPECIFICITY; TYROSINE KINASES; IKK2; INHIBITORS; LIBRARY DESIGN; POTENT;
D O I
10.1021/jm200349b
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
A kinase-focused screening set of fragments has been assembled and has proved successful for the discovery of ligand-efficient hits against many targets. Here we present some of our general conclusions from this exercise. Notably, we present the first profiling results for literature fragments that have previously been used as starting points for optimization against individual kinases. We consider the importance of screening format and the extent to which selectivity is helpful in selecting fragments for progression. Results are also outlined for fragments targeting the DFG-out conformation and for atypical kinases such as PM and lipid kinases.
引用
收藏
页码:5131 / 5143
页数:13
相关论文
共 89 条
[21]   A rule of three for fragment-based lead discovery? [J].
Congreve, M ;
Carr, R ;
Murray, C ;
Jhoti, H .
DRUG DISCOVERY TODAY, 2003, 8 (19) :876-877
[22]   Recent developments in fragment-based drug discovery [J].
Congreve, Miles ;
Chessari, Gianni ;
Tisi, Dominic ;
Woodhead, Andrew J. .
JOURNAL OF MEDICINAL CHEMISTRY, 2008, 51 (13) :3661-3680
[23]   NMR methods in fragment screening: theory and a comparison with other biophysical techniques [J].
Dalvit, Claudio .
DRUG DISCOVERY TODAY, 2009, 14 (21-22) :1051-1057
[24]   Discovery of Leukotriene A4 Hydrolase Inhibitors Using Metabolomics Biased Fragment Crystallography [J].
Davies, Douglas R. ;
Mamat, Bjorn ;
Magnusson, Olafur T. ;
Christensen, Jeff ;
Haraldsson, Magnus H. ;
Mishra, Rama ;
Pease, Brian ;
Hansen, Erik ;
Singh, Jasbir ;
Zembower, David ;
Kim, Hidong ;
Kisclyov, Alex S. ;
Burgin, Alex B. ;
Gurney, Mark E. ;
Stewart, Lance J. .
JOURNAL OF MEDICINAL CHEMISTRY, 2009, 52 (15) :4694-4715
[25]   Fragment-Based Discovery of Inhibitors of Protein Kinase B [J].
Davies, Thomas G. ;
Woodhead, Steven J. ;
Collins, Ian .
CURRENT TOPICS IN MEDICINAL CHEMISTRY, 2009, 9 (18) :1705-1717
[26]  
*DAYL CHEM SYST IN, 2008, DAYL THEOR MAN
[27]   Transforming fragments into candidates: small becomes big in medicinal chemistry [J].
de Kloe, Gerdien E. ;
Bailey, David ;
Leurs, Rob ;
de Esch, Iwan J. P. .
DRUG DISCOVERY TODAY, 2009, 14 (13-14) :630-646
[28]   Discovery of aminoquinazolines as potent, orally bioavailable inhibitors of Lck: Synthesis, SAR, and in vivo anti-inflammatory activity [J].
DiMauro, Erin F. ;
Newcomb, John ;
Nunes, Joseph J. ;
Bemis, Jean E. ;
Boucher, Christina ;
Buchanan, John L. ;
Buckner, William H. ;
Cee, Victor J. ;
Chai, Lilly ;
Deak, Holly L. ;
Epstein, Linda F. ;
Faust, Ted ;
Gallant, Paul ;
Geuns-Meyer, Stephanie D. ;
Gore, Anu ;
Gu, Yan ;
Henkle, Brad ;
Hodous, Brian L. ;
Hsieh, Faye ;
Huang, Xin ;
Kim, Joseph L. ;
Lee, Josie H. ;
Martin, Matthew W. ;
Masse, Craig E. ;
McGowan, David C. ;
Metz, Daniela ;
Mohn, Deanna ;
Morgenstern, Kurt A. ;
Oliveira-dos-Santos, Antonio ;
Patel, Vinod F. ;
Powers, David ;
Rose, Paul E. ;
Schneider, Stephen ;
Tomlinson, Susan A. ;
Tudor, Yan-Yan ;
Turci, Susan M. ;
Welcher, Andrew A. ;
White, Ryan D. ;
Zhao, Huilin ;
Zhu, Li ;
Zhu, Xiaotian .
JOURNAL OF MEDICINAL CHEMISTRY, 2006, 49 (19) :5671-5686
[29]   Rapid evolution of 6-phenylpurine inhibitors of protein kinase B through structure-based design [J].
Donald, Alastair ;
McHardy, Tatiana ;
Rowlands, Martin G. ;
Hunter, Lisa-Jane K. ;
Davies, Thomas G. ;
Berdini, Valerio ;
Boyle, Robert G. ;
Aherne, G. Wynne ;
Garrett, Michelle D. ;
Collins, Ian .
JOURNAL OF MEDICINAL CHEMISTRY, 2007, 50 (10) :2289-2292
[30]   Experimental Validation of a Fragment Library for Lead Discovery Using SPR Biosensor Technology [J].
Elinder, Malin ;
Geitmann, Matthis ;
Gossas, Thomas ;
Kallblad, Per ;
Winquist, Johan ;
Nordstrom, Helena ;
Hamalainen, Markku ;
Danielson, U. Helena .
JOURNAL OF BIOMOLECULAR SCREENING, 2011, 16 (01) :15-25