Evolution of the Sequence Ontology terms and relationships

被引：53

作者：

Mungall, Christopher J. ^{[3
]}

Batchelor, Colin ^{[2
]}

Eilbeck, Karen ^{[1
]}

机构：

[1] Univ Utah, Dept Human Genet, Salt Lake City, UT 84112 USA

[2] Royal Soc Chem, Cambridge CB4 0WF, England

[3] Univ Calif Berkeley, Lawrence Berkeley Lab, Berkeley, CA 94720 USA

来源：

JOURNAL OF BIOMEDICAL INFORMATICS | 2011年 / 44卷 / 01期

关键词：

Sequence Ontology; Biomedical ontology; Genome annotation; UNIFICATION; TOOL;

D O I：

10.1016/j.jbi.2010.03.002

中图分类号：

TP39 [计算机的应用];

学科分类号：

081203 ; 0835 ;

摘要：

The Sequence Ontology is an established ontology, with a large user community, for the purpose of genomic annotation. We are reforming the ontology to provide better terms and relationships to describe the features of biological sequence, for both genomic and derived sequence. The SO is working within the guidelines of the OBO Foundry to provide interoperability between SO and the other related OBO ontologies. Here, we report changes and improvements made to SO including new relationships to better define the mereological, spatial and temporal aspects of biological sequence. (C) 2010 Elsevier Inc. All rights reserved.

引用

页码：87 / 93

页数：7

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