A topographically and conformationally constrained, spin-labeled, α-amino acid:: crystallographic characterization in peptides

被引:30
作者
Crisma, M
Deschamps, JR
George, C
Flippen-Anderson, JL
Kaptein, B
Broxterman, QB
Moretto, A
Oancea, S
Jost, M
Formaggio, F
Toniolo, C
机构
[1] Univ Padua, Dept Chem, CNR, Inst Biomol Chem, I-35131 Padua, Italy
[2] USN, Struct Matter Lab, Res Lab, Washington, DC 20375 USA
[3] DSM Res & Patents, Life Sci, Adv Synth & Catalysis, NL-6160 MD Geleen, Netherlands
来源
JOURNAL OF PEPTIDE RESEARCH | 2005年 / 65卷 / 06期
关键词
beta-turn; 3(10)-helix; C-alpha-tetrasubstituted alpha-amino acid; nitroxide spin label; peptide synthesis; X-ray diffraction;
D O I
10.1111/j.1399-3011.2005.00258.x
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
2,2,6,6-Tetramethylpiperidine-1-oxyl-4-amino-4-carboxylic acid (TOAC) is a topographically and conformationally restricted, nitroxide containing, C-alpha-tetrasubstituted alpha-amino acid. Here, we describe the molecular and crystal structures, as determined by X-ray diffraction analyses, of a TOAC terminally protected derivative, the cyclic dipeptide c(TOAC)(2).1,1,1,3,3,3-hexafluoropropan-2-ol (HFIP) solvate, and five TOAC-containing, terminally protected, linear peptides ranging in length from tetra- to hepta-peptides. Incipient and fully developed, regular or distorted 3(10)-helical structures are formed by the linear peptides. A detailed discussion on the average geometry and preferred conformation for the TOAC piperidine ring is also reported. The X-ray diffraction structure of an intramolecularly cyclized side product resulting from a C-activated TOAC residue has also been determined.
引用
收藏
页码:564 / 579
页数:16
相关论文
共 96 条
[61]  
Pavone V, 1996, BIOPOLYMERS, V38, P705, DOI 10.1002/(SICI)1097-0282(199606)38:6<705::AID-BIP3>3.0.CO
[62]  
2-V
[63]   LINEAR OLIGOPEPTIDES .177. STRUCTURAL VERSATILITY OF PEPTIDES FROM C-ALPHA,ALPHA-DIALKYLATED GLYCINES - A CONFORMATIONAL ENERGY COMPUTATION AND X-RAY-DIFFRACTION STUDY OF HOMOPEPTIDES FROM 1-AMINOCYCLOHEXANE-1-CARBOXYLIC ACID [J].
PAVONE, V ;
BENEDETTI, E ;
BARONE, V ;
DIBLASIO, B ;
LELJ, F ;
PEDONE, C ;
SANTINI, A ;
CRISMA, M ;
BONORA, GM ;
TONIOLO, C .
MACROMOLECULES, 1988, 21 (07) :2064-2071
[64]  
Pispisa B, 2000, BIOPOLYMERS, V53, P169, DOI 10.1002/(SICI)1097-0282(200002)53:2<169::AID-BIP7>3.0.CO
[65]  
2-F
[66]   Linear oligopeptides .360. Peptide helices as rigid molecular rulers: A conformational study of isotactic homopeptides from alpha-methyl-alpha-isopropylglycine, [L-(alpha Me)Val](n) [J].
Polese, A ;
Formaggio, F ;
Crisma, M ;
Valle, G ;
Toniolo, C ;
Bonora, GM ;
Broxterman, QB ;
Kamphuis, J .
CHEMISTRY-A EUROPEAN JOURNAL, 1996, 2 (09) :1104-1111
[67]  
RAMAKRISHNAN C, 1971, INT J PROT RES, V3, P209
[68]   CONSTRAINED PEPTIDES - MODELS OF BIOACTIVE PEPTIDES AND PROTEIN SUBSTRUCTURES [J].
RIZO, J ;
GIERASCH, LM .
ANNUAL REVIEW OF BIOCHEMISTRY, 1992, 61 :387-418
[69]   TURNS IN PEPTIDES AND PROTEINS [J].
ROSE, GD ;
GIERASCH, LM ;
SMITH, JA .
ADVANCES IN PROTEIN CHEMISTRY, 1985, 37 :1-109
[70]   Intramolecular interaction between nitroxide radical and photoexcited benzophenone triplet linked to peptide templates [J].
Sartori, E ;
Toffoletti, A ;
Rastrelli, F ;
Corvaja, C ;
Bettio, A ;
Formaggio, F ;
Oancea, S ;
Toniolo, C .
JOURNAL OF PHYSICAL CHEMISTRY A, 2003, 107 (36) :6905-6912