An abundance of RNA regulators

被引:284
作者
Storz, G [1 ]
Altuvia, S
Wassarman, KM
机构
[1] NICHHD, Cell Biol & Metab Branch, NIH, Bethesda, MD 20892 USA
[2] Hebrew Univ Jerusalem, Fac Med, Dept Mol Genet & Biotechnol, IL-91120 Jerusalem, Israel
[3] Univ Wisconsin, Dept Bacteriol, Madison, WI 53706 USA
关键词
noncoding RNA; antisense RNA; small RNA; microRNA;
D O I
10.1146/annurev.biochem.74.082803.133136
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The importance of small, noncoding RNAs that act as regulators of transcription, of RNA modification or stability, and of mRNA translation is becoming increasingly apparent. Here we discuss current knowledge of regulatory RNA function and review how the RNAs have been identified in a variety of organisms. Many of the regulatory RNAs act through base-pairing interactions with target RNAs. The base-pairing RNAs can be grouped into two general classes: those that are encoded on the opposite strand of their target RNAs such that they contain perfect complementarity with their targets, and those that are encoded at separate locations on the chromosome and have imperfect base-pairing potential with their targets. Other regulatory RNAs act by modifying protein activity, in some cases by mimicking the structures of other RNA or DNA molecules.
引用
收藏
页码:199 / 217
页数:19
相关论文
共 119 条
  • [1] The SINE-encoded mouse B2 RNA represses mRNA transcription in response to heat shock
    Allen, TA
    Von Kaenel, S
    Goodrich, JA
    Kugel, JF
    [J]. NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2004, 11 (09) : 816 - 821
  • [2] Epigenetic gene regulation by noncoding RNAs
    Andersen, AA
    Panning, B
    [J]. CURRENT OPINION IN CELL BIOLOGY, 2003, 15 (03) : 281 - 289
  • [3] Novel small RNA-encoding genes in the intergenic regions of Escherichia coli
    Argaman, L
    Hershberg, R
    Vogel, J
    Bejerano, G
    Wagner, EGH
    Margalit, H
    Altuvia, S
    [J]. CURRENT BIOLOGY, 2001, 11 (12) : 941 - 950
  • [4] MicroRNAs: Genomics, biogenesis, mechanism, and function (Reprinted from Cell, vol 116, pg 281-297, 2004)
    Bartel, David P.
    [J]. CELL, 2007, 131 (04) : 11 - 29
  • [5] Antisense RNA-mediated transcriptional attenuation:: an in vitro study of plasmid pT181
    Brantl, S
    Wagner, EGH
    [J]. MOLECULAR MICROBIOLOGY, 2000, 35 (06) : 1469 - 1482
  • [6] Burge CB, 1999, RNA WORLD, P525
  • [7] A computational approach to identify genes for functional RNAs in genomic sequences
    Carter, RJ
    Dubchak, I
    Holbrook, SR
    [J]. NUCLEIC ACIDS RESEARCH, 2001, 29 (19) : 3928 - 3938
  • [8] Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization
    Cavaillé, J
    Buiting, K
    Kiefmann, M
    Lalande, M
    Brannan, CI
    Horsthemke, B
    Bachellerie, JP
    Brosius, J
    Hüttenhofer, A
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (26) : 14311 - 14316
  • [9] Telomerase RNA structure and function: implications for dyskeratosis congenita
    Chen, JL
    Greider, CW
    [J]. TRENDS IN BIOCHEMICAL SCIENCES, 2004, 29 (04) : 183 - 192
  • [10] MicC, a second small-RNA regulator of Omp protein expression in Escherichia coli
    Chen, S
    Zhang, AX
    Blyn, LB
    Storz, G
    [J]. JOURNAL OF BACTERIOLOGY, 2004, 186 (20) : 6689 - 6697