Enabling plant synthetic biology through genome engineering

被引:159
作者
Baltes, Nicholas J.
Voytas, Daniel F. [1 ]
机构
[1] Univ Minnesota, Dept Genet Cell Biol & Dev, Minneapolis, MN 55455 USA
关键词
synthetic biology; sequence-specific nuclease; zinc-finger nuclease; TALEN; CRISPR/Cas; genome engineering; STRAND BREAK REPAIR; ZINC-FINGER NUCLEASES; TARGETED MUTAGENESIS; HOMOLOGOUS RECOMBINATION; TRANSCRIPTION FACTORS; GENE-EXPRESSION; TRAIT STACKING; HUMAN-CELLS; I-CREI; T-DNA;
D O I
10.1016/j.tibtech.2014.11.008
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Synthetic biology seeks to create new biological systems, including user-designed plants and plant cells. These systems can be employed for a variety of purposes, ranging from producing compounds of industrial or therapeutic value, to reducing crop losses by altering cellular responses to pathogens or climate change. To realize the full potential of plant synthetic biology, techniques are required that provide control over the genetic code - enabling targeted modifications to DNA sequences within living plant cells. Such control is now within reach owing to recent advances in the use of sequence-specific nucleases to precisely engineer genomes. We discuss here the enormous potential provided by genome engineering for plant synthetic biology.
引用
收藏
页码:120 / 131
页数:12
相关论文
共 88 条
[41]   The transition to a bio-economy: emerging from the oil age [J].
Kircher, Manfred .
BIOFUELS BIOPRODUCTS & BIOREFINING-BIOFPR, 2012, 6 (04) :369-375
[42]   High-efficiency TALEN-based gene editing produces disease-resistant rice [J].
Li, Ting ;
Liu, Bo ;
Spalding, Martin H. ;
Weeks, Donald P. ;
Yang, Bing .
NATURE BIOTECHNOLOGY, 2012, 30 (05) :390-392
[43]   Targeted Mutagenesis in Zea mays Using TALENs and the CRISPR/Cas System [J].
Liang, Zhen ;
Zhang, Kang ;
Chen, Kunling ;
Gao, Caixia .
JOURNAL OF GENETICS AND GENOMICS, 2014, 41 (02) :63-68
[44]   Rapid "Open-Source" engineering of customized zinc-finger nucleases for highly efficient gene modification [J].
Maeder, Morgan L. ;
Thibodeau-Beganny, Stacey ;
Osiak, Anna ;
Wright, David A. ;
Anthony, Reshma M. ;
Eichtinger, Magdalena ;
Jiang, Tao ;
Foley, Jonathan E. ;
Winfrey, Ronnie J. ;
Townsend, Jeffrey A. ;
Unger-Wallace, Erica ;
Sander, Jeffry D. ;
Mueller-Lerch, Felix ;
Fu, Fengli ;
Pearlberg, Joseph ;
Goebel, Carl ;
Dassie, Justin P. ;
Pruett-Miller, Shondra M. ;
Porteus, Matthew H. ;
Sgroi, Dennis C. ;
Iafrate, A. John ;
Dobbs, Drena ;
McCray, Paul B., Jr. ;
Cathomen, Toni ;
Voytas, Daniel F. ;
Joung, J. Keith .
MOLECULAR CELL, 2008, 31 (02) :294-301
[45]  
Maeder ML, 2013, NAT METHODS, V10, P977, DOI [10.1038/NMETH.2598, 10.1038/nmeth.2598]
[46]   Targeted transcriptional repression using a chimeric TALE-SRDX repressor protein [J].
Mahfouz, Magdy M. ;
Li, Lixin ;
Piatek, Marek ;
Fang, Xiaoyun ;
Mansour, Hicham ;
Bangarusamy, Dhinoth K. ;
Zhu, Jian-Kang .
PLANT MOLECULAR BIOLOGY, 2012, 78 (03) :311-321
[47]   CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering [J].
Mali, Prashant ;
Aach, John ;
Stranges, P. Benjamin ;
Esvelt, Kevin M. ;
Moosburner, Mark ;
Kosuri, Sriram ;
Yang, Luhan ;
Church, George M. .
NATURE BIOTECHNOLOGY, 2013, 31 (09) :833-+
[48]   RNA-Guided Human Genome Engineering via Cas9 [J].
Mali, Prashant ;
Yang, Luhan ;
Esvelt, Kevin M. ;
Aach, John ;
Guell, Marc ;
DiCarlo, James E. ;
Norville, Julie E. ;
Church, George M. .
SCIENCE, 2013, 339 (6121) :823-826
[49]   Obligate Ligation-Gated Recombination (ObLiGaRe): Custom-designed nuclease-mediated targeted integration through nonhomologous end joining [J].
Maresca, Marcello ;
Lin, Victor Guosheng ;
Guo, Ning ;
Yang, Yi .
GENOME RESEARCH, 2013, 23 (03) :539-546
[50]   Nontransgenic Genome Modification in Plant Cells [J].
Marton, Ira ;
Zuker, Amir ;
Shklarman, Elena ;
Zeevi, Vardit ;
Tovkach, Andrey ;
Roffe, Suzy ;
Ovadis, Marianna ;
Tzfira, Tzvi ;
Vainstein, Alexander .
PLANT PHYSIOLOGY, 2010, 154 (03) :1079-1087