Enabling plant synthetic biology through genome engineering

被引:159
作者
Baltes, Nicholas J.
Voytas, Daniel F. [1 ]
机构
[1] Univ Minnesota, Dept Genet Cell Biol & Dev, Minneapolis, MN 55455 USA
关键词
synthetic biology; sequence-specific nuclease; zinc-finger nuclease; TALEN; CRISPR/Cas; genome engineering; STRAND BREAK REPAIR; ZINC-FINGER NUCLEASES; TARGETED MUTAGENESIS; HOMOLOGOUS RECOMBINATION; TRANSCRIPTION FACTORS; GENE-EXPRESSION; TRAIT STACKING; HUMAN-CELLS; I-CREI; T-DNA;
D O I
10.1016/j.tibtech.2014.11.008
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Synthetic biology seeks to create new biological systems, including user-designed plants and plant cells. These systems can be employed for a variety of purposes, ranging from producing compounds of industrial or therapeutic value, to reducing crop losses by altering cellular responses to pathogens or climate change. To realize the full potential of plant synthetic biology, techniques are required that provide control over the genetic code - enabling targeted modifications to DNA sequences within living plant cells. Such control is now within reach owing to recent advances in the use of sequence-specific nucleases to precisely engineer genomes. We discuss here the enormous potential provided by genome engineering for plant synthetic biology.
引用
收藏
页码:120 / 131
页数:12
相关论文
共 88 条
[51]   TALENs facilitate targeted genome editing in human cells with high specificity and low cytotoxicity [J].
Mussolino, Claudio ;
Alzubi, Jamal ;
Fine, Eli J. ;
Morbitzer, Robert ;
Cradick, Thomas J. ;
Lahaye, Thomas ;
Bao, Gang ;
Cathomen, Toni .
NUCLEIC ACIDS RESEARCH, 2014, 42 (10) :6762-6773
[52]   Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease [J].
Nekrasov, Vladimir ;
Staskawicz, Brian ;
Weigel, Detlef ;
Jones, Jonathan D. G. ;
Kamoun, Sophien .
NATURE BIOTECHNOLOGY, 2013, 31 (08) :691-693
[53]   Multiplexed and Programmable Regulation of Gene Networks with an Integrated RNA and CRISPR/Cas Toolkit in Human Cells [J].
Nissim, Lior ;
Perli, Samuel D. ;
Fridkin, Alexandra ;
Perez-Pinera, Pablo ;
Lu, Timothy K. .
MOLECULAR CELL, 2014, 54 (04) :698-710
[54]   Biotechnological solutions to the nitrogen problem [J].
Oldroyd, Giles E. D. ;
Dixon, Ray .
CURRENT OPINION IN BIOTECHNOLOGY, 2014, 26 :19-24
[55]   Site-directed mutagenesis in Arabidopsis using custom-designed zinc finger nucleases [J].
Osakabe, Keishi ;
Osakabe, Yuriko ;
Toki, Seiichi .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (26) :12034-12039
[56]   Zinc finger nuclease-mediated transgene deletion [J].
Petolino, Joseph F. ;
Worden, Andrew ;
Curlee, Krisi ;
Connell, James ;
Moynahan, Tonya L. Strange ;
Larsen, Cory ;
Russell, Sean .
PLANT MOLECULAR BIOLOGY, 2010, 73 (06) :617-628
[57]  
Piatek A., 2014, PLANT BIOTECHNOL J
[58]   Cancer translocations in human cells induced by zinc finger and TALE nucleases [J].
Piganeau, Marion ;
Ghezraoui, Hind ;
De Cian, Anne ;
Guittat, Lionel ;
Tomishima, Mark ;
Perrouault, Loic ;
Rene, Oliver ;
Katibah, George E. ;
Zhang, Lei ;
Holmes, Michael C. ;
Doyon, Yannick ;
Concordet, Jean-Paul ;
Giovannangeli, Carine ;
Jasin, Maria ;
Brunet, Erika .
GENOME RESEARCH, 2013, 23 (07) :1182-1193
[59]   The C-terminal loop of the homing endonuclease I-CreI is essential for site recognition, DNA binding and cleavage [J].
Prieto, Jesus ;
Redondo, Pilar ;
Padro, Daniel ;
Arnould, Sylvain ;
Epinat, Jean-Charles ;
Paques, Frederic ;
Blanco, Francisco J. ;
Montoya, Guillermo .
NUCLEIC ACIDS RESEARCH, 2007, 35 (10) :3262-3271
[60]   Two different but related mechanisms are used in plants for the repair of genomic double-strand breaks by homologous recombination [J].
Puchta, H ;
Dujon, B ;
Hohn, B .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (10) :5055-5060