Long-Range Distance Determination in a DNA Model System inside Xenopus laevis Oocytes by In-Cell Spin-Label EPR

被引:54
作者
Azarkh, Mykhailo [1 ,2 ]
Okle, Oliver [1 ,2 ]
Singh, Vijay [1 ,2 ]
Seemann, Isabelle T. [1 ,2 ]
Hartig, Joerg S. [1 ,2 ]
Dietrich, Daniel R. [1 ,2 ]
Drescher, Malte [1 ,2 ]
机构
[1] Univ Konstanz, Konstanz Res Sch Chem Biol & Zukunftskolleg, Dept Chem, D-78457 Constance, Germany
[2] Univ Konstanz, Konstanz Res Sch Chem Biol & Zukunftskolleg, Dept Biol, D-78457 Constance, Germany
关键词
EPR distance measurements; EPR spectroscopy; in-cell DEER; spin labeling; structure elucidation; PULSE EPR; RESONANCE; PELDOR; OLIGONUCLEOTIDES; SPECTROSCOPY; EMBRYOS; ACIDS; EGGS;
D O I
10.1002/cbic.201100281
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
[No abstract available]
引用
收藏
页码:1992 / 1995
页数:4
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