Eukaryotic plankton diversity in the sunlit ocean

被引：1435

作者：

de Vargas, Colomban ^{[1
,2
]}

Audic, Stephane ^{[1
,2
]}

Henry, Nicolas ^{[1
,2
]}

Decelle, Johan ^{[1
,2
]}

Mahe, Frederic ^{[1
,2
,3
]}

Logares, Ramiro ^{[4
]}

Lara, Enrique ^{[5
]}

Berney, Cedric ^{[1
,2
]}

Le Bescot, Noan ^{[1
,2
]}

Probert, Ian ^{[6
,7
]}

Carmichael, Margaux ^{[1
,2
,8
,9
,10
]}

Poulain, Julie ^{[11
]}

Romac, Sarah ^{[1
,2
]}

Colin, Sebastien ^{[1
,2
,8
,9
,10
]}

Aury, Jean-Marc ^{[11
]}

Bittner, Lucie ^{[1
,2
,8
,9
,10
,12
,13
]}

Chaffron, Samuel ^{[14
,15
,16
]}

Dunthorn, Micah ^{[3
]}

Engelen, Stefan ^{[11
]}

Flegontova, Olga ^{[17
,18
]}

Guidi, Lionel ^{[19
,20
]}

Horak, Ales ^{[17
,18
]}

Jaillon, Olivier ^{[11
,21
,22
]}

Lima-Mendez, Gipsi ^{[14
,15
,16
]}

Lukes, Julius ^{[17
,18
,23
]}

Malviya, Shruti ^{[8
,9
,10
]}

Morard, Raphael ^{[1
,2
,24
]}

Mulot, Matthieu ^{[5
]}

Scalco, Eleonora ^{[25
]}

Siano, Raffaele ^{[26
]}

Vincent, Flora ^{[8
,9
,10
,15
]}

Zingone, Adriana ^{[25
]}

Dimier, Celine ^{[1
,2
,8
,9
,10
]}

Picheral, Marc ^{[19
,20
]}

Searson, Sarah ^{[19
,20
]}

Kandels-Lewis, Stefanie ^{[27
,28
]}

Acinas, Silvia G. ^{[4
]}

Bork, Peer ^{[27
,29
]}

Bowler, Chris ^{[8
,9
,10
]}

Gorsky, Gabriel ^{[19
,20
]}

Grimsley, Nigel ^{[30
,31
]}

Hingamp, Pascal ^{[32
]}

Iudicone, Daniele ^{[25
]}

Not, Fabrice ^{[1
,2
]}

Ogata, Hiroyuki ^{[33
]}

Pesant, Stephane ^{[34
]}

Raes, Jeroen ^{[14
,15
,16
]}

Sieracki, Michael E. ^{[35
,36
]}

Speich, Sabrina ^{[37
,38
]}

Stemmann, Lars ^{[19
,20
]}

机构：

[1] CNRS, UMR 7144, Stn Biol Roscoff, F-29680 Roscoff, France

[2] Univ Paris 06, Sorbonne Univ, UMR 7144, Stn Biol Roscoff, F-29680 Roscoff, France

[3] Univ Kaiserslautern, Dept Ecol, D-67663 Kaiserslautern, Germany

[4] CSIC, Inst Marine Sci ICM, Dept Marine Biol & Oceanog, E-08003 Barcelona, Spain

[5] Univ Neuchatel, Lab Soil Biol, CH-2000 Neuchatel, Switzerland

[6] CNRS, FR2424, Roscoff Culture Collect, Stn Biol Roscoff, F-29680 Roscoff, France

[7] Univ Paris 06, Sorbonne Univ, FR 2424, Roscoff Culture Collect,Stn Biol Roscoff, F-29680 Roscoff, France

[8] Ecole Normale Super, IBENS, F-75005 Paris, France

[9] INSERM, U1024, F-75005 Paris, France

[10] CNRS, UMR 8197, F-75005 Paris, France

[11] Commissariat Energie Atom & Energies Alternat CEA, Inst Genom, GENOSCOPE, F-91000 Evry, France

[12] CNRS, FR3631, Inst Biol Paris Seine, F-75005 Paris, France

[13] Univ Paris 06, Sorbonne Univ, Inst Biol Paris Seine, F-75005 Paris, France

[14] Katholieke Univ Leuven, Rega Inst, Dept Microbiol & Immunol, B-3000 Leuven, Belgium

[15] VIB, Ctr Biol Dis, B-3000 Leuven, Belgium

[16] Vrije Univ Brussel, Dept Appl Biol Sci, B-1050 Brussels, Belgium

[17] Czech Acad Sci, Ctr Biol, Inst Parasitol, Ceske Budejovice 37005, Czech Republic

[18] Univ South Bohemia, Fac Sci, Ceske Budejovice 37005, Czech Republic

[19] CNRS, UMR 7093, LOV, Observ Oceanol, F-06230 Villefranche Sur Mer, France

[20] Univ Paris 06, Sorbonne Univ, UMR 7093, LOV,Observ Oceanol, F-06230 Villefranche Sur Mer, France

[21] CNRS, UMR 8030, CP5706, Evry, France

[22] Univ Evry, UMR 8030, CP5706, Evry, France

[23] Canadian Inst Adv Res, Toronto, ON M5G 1Z8, Canada

[24] Univ Bremen, Ctr Marine Environm Sci, MARUM, D-28359 Bremen, Germany

[25] Stn Zool A Dohrn, I-80121 Naples, Italy

[26] IFREMER, Ctr Brest, DYNECO Pelagos CS 10070, F-29280 Plouzane, France

[27] European Mol Biol Lab, Struct & Computat Biol, D-69117 Heidelberg, Germany

[28] European Mol Biol Lab, Directors Res, D-69117 Heidelberg, Germany

[29] Max Delbruck Ctr Mol Med, D-13092 Berlin, Germany

[30] CNRS, UMR 7232, BIOM, F-66650 Banyuls Sur Mer, France

[31] Univ Paris 06, Sorbonne Univ, OOB, F-66650 Banyuls Sur Mer, France

[32] Aix Marseille Univ, CNRS IGS UMR 7256, F-13288 Marseille, France

[33] Kyoto Univ, Inst Chem Res, Kyoto 6110011, Japan

[34] Univ Bremen, Data Publisher Earth & Environm Sci, PANGAEA, D-28359 Bremen, Germany

[35] Bigelow Lab Ocean Sci, East Boothbay, ME 04544 USA

[36] Natl Sci Fdn, Arlington, VA 22230 USA

[37] Ecole Normale Super, LMD, Dept Geosci, F-75231 Paris 05, France

[38] UBO, IUEM, Lab Phys Oceans, F-29820 Plouzane, France

来源：

SCIENCE | 2015年 / 348卷 / 6237期

基金：

欧洲研究理事会; 芬兰科学院; 日本学术振兴会;

关键词：

EXTREME DIVERSITY; GENETIC DIVERSITY; SURFACE WATERS; MARINE; PICOPLANKTON; RADIOLARIA; EVOLUTION; TERRESTRIAL; PSEUDOGENES; SEQUENCES;

D O I：

10.1126/science.1261605

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

070301 [无机化学]; 070403 [天体物理学]; 070507 [自然资源与国土空间规划学]; 090105 [作物生产系统与生态工程];

摘要：

Marine plankton support global biological and geochemical processes. Surveys of their biodiversity have hitherto been geographically restricted and have not accounted for the full range of plankton size. We assessed eukaryotic diversity from 334 size-fractionated photic-zone plankton communities collected across tropical and temperate oceans during the circumglobal Tara Oceans expedition. We analyzed 18S ribosomal DNA sequences across the intermediate plankton-size spectrum from the smallest unicellular eukaryotes (protists, > 0.8 micrometers) to small animals of a few millimeters. Eukaryotic ribosomal diversity saturated at similar to 150,000 operational taxonomic units, about one-third of which could not be assigned to known eukaryotic groups. Diversity emerged at all taxonomic levels, both within the groups comprising the similar to 11,200 cataloged morphospecies of eukaryotic plankton and among twice as many other deep-branching lineages of unappreciated importance in plankton ecology studies. Most eukaryotic plankton biodiversity belonged to heterotrophic protistan groups, particularly those known to be parasites or symbiotic hosts.

引用

页数：11

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