A homogeneous resonance energy transfer assay for phosphopantetheinyl transferase

被引:13
作者
Foley, Timothy L. [1 ]
Burkart, Michael D. [1 ]
机构
[1] Univ Calif San Diego, Dept Chem & Biochem, La Jolla, CA 92093 USA
基金
美国国家卫生研究院;
关键词
Phosphopantetheinyl transferase; Assay development; High-throughput screen; FRET assay; Fluorescent analogue; Coenzyme A; Acyl carrier protein; Peptidyl carrier protein; Secondary metabolism; ACYL CARRIER PROTEIN; THROUGHPUT SCREENING ASSAYS; ESCHERICHIA-COLI; MYCOBACTERIUM-TUBERCULOSIS; PSEUDOMONAS-AERUGINOSA; SMALL MOLECULES; PDXJ OPERON; FATTY-ACID; SYNTHASE; BIOSYNTHESIS;
D O I
10.1016/j.ab.2009.06.037
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Phosphopantetheinyl transferase plays an essential role in activating fatty acid, polyketide, and nonribosomal peptide biosynthetic pathways, catalyzing covalent attachment of a 4'-phosphopantetheinyl group to a conserved residue within carrier protein domains. This enzyme has been validated as an essential gene to primary metabolism and presents a target for the identification of antibiotics with a new mode of action. Here we report the development of a homogeneous resonance energy transfer assay using fluorescent coenzyme A derivatives and a surrogate peptide substrate that can serve to identify inhibitors of this enzyme class. This assay lays a blueprint for translation of these techniques to other transferase enzymes that accept fluorescent substrate analogues. Published by Elsevier Inc.
引用
收藏
页码:39 / 47
页数:9
相关论文
共 38 条
[1]   Genetic characterization of pcpS, encoding the multifunctional phosphopantetheinyl transferase of Pseudomonas aeruginosa [J].
Barekzi, N ;
Joshi, S ;
Irwin, S ;
Ontl, T ;
Schweizer, HP .
MICROBIOLOGY-SGM, 2004, 150 :795-803
[2]   Fluorescence anisotropy assay for proteolysis of specifically labeled fusion proteins [J].
Blommel, PG ;
Fox, BG .
ANALYTICAL BIOCHEMISTRY, 2005, 336 (01) :75-86
[3]  
Campbell I.D.R.A. Dwek., 1984, BIOL SPECTROSCOPY
[4]   Structure elucidation of Sch 538415, a novel acyl carrier protein synthase inhibitor from a microorganism [J].
Chu, M ;
Mierzwa, R ;
Xu, L ;
Yang, SW ;
He, L ;
Patel, M ;
Stafford, J ;
Macinga, D ;
Black, T ;
Chan, TM ;
Gullo, V .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2003, 13 (21) :3827-3829
[5]   Exploiting ligand conformation in selective inhibition of non-ribosomal peptide synthetase amino acid adenylation with designed macrocyclic small molecules [J].
Cisar, Justin S. ;
Ferreras, Julian A. ;
Soni, Rajesh K. ;
Quadri, Luis E. N. ;
Tan, Derek S. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2007, 129 (25) :7752-+
[6]   Mycobacterial phenolic glycolipid virulence factor biosynthesis: Mechanism and small-molecule inhibition of polyketide chain initiation [J].
Ferreras, Julian A. ;
Stirrett, Karen L. ;
Lu, Xuequan ;
Ryu, Jae-Sang ;
Soll, Clifford E. ;
Tan, Derek S. ;
Quadri, Luis E. N. .
CHEMISTRY & BIOLOGY, 2008, 15 (01) :51-61
[7]   Characterization of a new type of phosphopantetheinyl transferase for fatty acid and siderophore synthesis in Pseudomonas aeruginosa [J].
Finking, R ;
Solsbacher, J ;
Konz, D ;
Schobert, M ;
Schäfer, A ;
Jahn, D ;
Marahiel, MA .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (52) :50293-50302
[8]   Anthranilate 4H-oxazol-5-ones:: novel small molecule antibacterial acyl carrier protein synthase (AcpS) inhibitors [J].
Gilbert, AM ;
Kirisits, M ;
Toy, P ;
Nunn, DS ;
Failli, A ;
Dushin, EG ;
Novikova, E ;
Petersen, PJ ;
Joseph-McCarthy, D ;
McFadyen, L ;
Fritze, CC .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2004, 14 (01) :37-41
[9]   Preparation of insoluble transmembrane peptides: Glycophorin-A, prion (110-137), and FGFR (368-397) [J].
Glover, KJ ;
Martini, PM ;
Vold, RR ;
Komives, EA .
ANALYTICAL BIOCHEMISTRY, 1999, 272 (02) :270-274
[10]   Chemical and posttranslational modification of Escherichia coli acyl carrier protein for preparation of dansyl-acyl carrier proteins' [J].
Haas, JA ;
Frederick, MA ;
Fox, BG .
PROTEIN EXPRESSION AND PURIFICATION, 2000, 20 (02) :274-284