Selenoproteins in Archaea and Gram-positive bacteria

被引:59
作者
Stock, Tilmann [1 ]
Rother, Michael [1 ]
机构
[1] Goethe Univ Frankfurt, Inst Mol Biowissensch, D-60438 Frankfurt, Germany
来源
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS | 2009年 / 1790卷 / 11期
关键词
Selenium; Selenocysteine; Selenoprotein; Clostridium; Moorella; Eubacterium; Methanococcus maripaludis; COMPLETE GENOME SEQUENCE; H-2-FORMING METHYLENETETRAHYDROMETHANOPTERIN DEHYDROGENASE; DEPENDENT FORMATE DEHYDROGENASE; SELENIUM-FREE HYDROGENASES; BOUND ELECTRON-TRANSPORT; SOLUBLE LIVER ANTIGEN; RNA-BINDING FRAGMENT; D-PROLINE REDUCTASE; ELONGATION-FACTOR; GLYCINE REDUCTASE;
D O I
10.1016/j.bbagen.2009.03.022
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Selenium is an essential trace element for many organisms by serving important catalytic roles in the form of the 21st co-translationally inserted amino acid selenocysteine. It is mostly found in redox-active proteins in members of all three domains of life and analysis of the ever-increasing number of genome sequences has facilitated identification of the encoded selenoproteins. Available data from biochemical, sequence, and structure analyses indicate that Gram-positive bacteria synthesize and incorporate selenocysteine via the same pathway as enterobacteria. However, recent in vivo studies indicate that selenocysteine-decoding is much less stringent in Gram-positive bacteria than in Escherichia coli. For years, knowledge about the pathway of selenocysteine synthesis in Archaea and Eukarya was only fragmentary, but genetic and biochemical studies guided by analysis of genome sequences of Sec-encoding archaea has not only led to the characterization of the pathways but has also shown that they are principally identical. This review summarizes current knowledge about the metabolic pathways of Archaea and Gram-positive bacteria where selenium is involved, about the known selenoproteins, and about the respective pathways employed in selenoprotein synthesis. (C) 2009 Elsevier B.V. All rights reserved.
引用
收藏
页码:1520 / 1532
页数:13
相关论文
共 184 条
[61]   A selDABC cluster for selenocysteine incorporation in Eubacterium acidaminophilum [J].
Gursinsky, T ;
Jäger, J ;
Andreesen, JR ;
Söhling, B .
ARCHIVES OF MICROBIOLOGY, 2000, 174 (03) :200-212
[62]   Factors and selenocysteine insertion sequence requirements for the synthesis of selenoproteins from a gram-positive anaerobe in Escherichia coli [J].
Gursinsky, Torsten ;
Groebe, Daniel ;
Schierhorn, Angelika ;
Jaeger, Jana ;
Andreesen, Jan R. ;
Soehling, Brigitte .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2008, 74 (05) :1385-1393
[63]   METHANOCOCCUS-VOLTAE HARBORS 4 GENE CLUSTERS POTENTIALLY ENCODING 2[NIFE] AND 2[NIFESE] HYDROGENASES, EACH OF THE COFACTOR F420-REDUCING OR F420-NON-REDUCING TYPES [J].
HALBOTH, S ;
KLEIN, A .
MOLECULAR AND GENERAL GENETICS, 1992, 233 (1-2) :217-224
[64]   ISOLATION OF A SELENIUM-CONTAINING THIOLASE FROM CLOSTRIDIUM-KLUYVERI - IDENTIFICATION OF THE SELENIUM MOIETY AS SELENOMETHIONINE [J].
HARTMANIS, MGN ;
STADTMAN, TC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1982, 79 (16) :4912-4916
[65]   SUPPRESSION OF TERMINATION CODONS IN HIGHER EUKARYOTES [J].
HATFIELD, D .
TRENDS IN BIOCHEMICAL SCIENCES, 1985, 10 (05) :201-204
[66]   Energy-converting [NiFe] hydrogenases:: More than just H2 activation [J].
Hedderich, R ;
Forzi, L .
JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY, 2005, 10 (2-4) :92-104
[67]   Heterodisulfide reductase from methanogenic archaea: a new catalytic role for an iron-sulfur cluster [J].
Hedderich, R ;
Hamann, N ;
Bennati, M .
BIOLOGICAL CHEMISTRY, 2005, 386 (10) :961-970
[68]   INTERSPECIES COMPATIBILITY OF SELENOPROTEIN BIOSYNTHESIS IN ENTEROBACTERIACEAE [J].
HEIDER, J ;
FORCHHAMMER, K ;
SAWERS, G ;
BOCK, A .
ARCHIVES OF MICROBIOLOGY, 1991, 155 (03) :221-228
[69]   TARGETED INSERTION OF SELENOCYSTEINE INTO THE ALPHA-SUBUNIT OF FORMATE DEHYDROGENASE FROM METHANOBACTERIUM-FORMICICUM [J].
HEIDER, J ;
BOCK, A .
JOURNAL OF BACTERIOLOGY, 1992, 174 (03) :659-663
[70]   Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis [J].
Hendrickson, EL ;
Kaul, R ;
Zhou, Y ;
Bovee, D ;
Chapman, P ;
Chung, J ;
de Macario, EC ;
Dodsworth, JA ;
Gillett, W ;
Graham, DE ;
Hackett, M ;
Haydock, AK ;
Kang, A ;
Land, ML ;
Levy, R ;
Lie, TJ ;
Major, TA ;
Moore, BC ;
Porat, I ;
Palmeiri, A ;
Rouse, G ;
Saenphimmachak, C ;
Söll, D ;
Van Dien, S ;
Wang, T ;
Whitman, WB ;
Xia, Q ;
Zhang, Y ;
Larimer, FW ;
Olson, MV ;
Leigh, JA .
JOURNAL OF BACTERIOLOGY, 2004, 186 (20) :6956-6969