How to find an opening (or lots of them)

被引:7
作者
Giresi, Paul G.
Lieb, Jason D.
机构
[1] Univ N Carolina, Dept Biol, Chapel Hill, NC 27599 USA
[2] Univ N Carolina, Carolina Ctr Genome Sci, Chapel Hill, NC 27599 USA
关键词
D O I
10.1038/nmeth0706-501
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
DNase-chip and DNase-array: similar names for two different new approaches that give a genomic perspective to the conventional DNase I hypersensitivity assay used to measure chromatin accessibility.
引用
收藏
页码:501 / 502
页数:2
相关论文
共 17 条
[11]   Termination factor-mediated DNA loop between termination and initiation sites drives mitochondrial rRNA synthesis [J].
Martin, M ;
Cho, JY ;
Cesare, AJ ;
Griffith, JD ;
Attardi, G .
CELL, 2005, 123 (07) :1227-1240
[12]   A 200-BASE PAIR REGION AT THE 5' END OF THE CHICKEN ADULT BETA-GLOBIN GENE IS ACCESSIBLE TO NUCLEASE DIGESTION [J].
MCGHEE, JD ;
WOOD, WI ;
DOLAN, M ;
ENGEL, JD ;
FELSENFELD, G .
CELL, 1981, 27 (01) :45-55
[13]   INVIVO PROTEIN-BINDING SITES AND NUCLEASE HYPERSENSITIVITY IN THE PROMOTER REGION OF A CELL-CYCLE REGULATED HUMAN H-3 HISTONE GENE [J].
PAULI, U ;
CHRYSOGELOS, S ;
NICK, H ;
STEIN, G ;
STEIN, J .
NUCLEIC ACIDS RESEARCH, 1989, 17 (06) :2333-2350
[14]   Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays [J].
Sabo, Peter J. ;
Kuehn, Michael S. ;
Thurman, Robert ;
Johnson, Brett E. ;
Johnson, Ericka M. ;
Hua Cao ;
Man Yu ;
Rosenzweig, Elizabeth ;
Goldy, Jeff ;
Haydock, Andrew ;
Weaver, Molly ;
Shafer, Anthony ;
Lee, Kristin ;
Neri, Fidencio ;
Humbert, Richard ;
Singer, Michael A. ;
Richmond, Todd A. ;
O Dorschner, Michael ;
McArthur, Michael ;
Hawrylycz, Michael ;
Green, Roland D. ;
Navas, Patrick A. ;
Noble, William S. ;
Stamatoyannopoulos, John A. .
NATURE METHODS, 2006, 3 (07) :511-518
[15]   Discovery of functional noncoding elements by digital analysis of chromatin structure [J].
Sabo, PJ ;
Hawrylycz, M ;
Wallace, JC ;
Humbert, R ;
Yu, M ;
Shafer, A ;
Kawamoto, J ;
Hall, R ;
Mack, J ;
Dorschner, MO ;
McArthur, M ;
Stamatoyannopoulos, JA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (48) :16837-16842
[16]   Genome-wide identification of DNasel hypersensitive sites using active chromatin sequence libraries [J].
Sabo, PJ ;
Humbert, R ;
Hawrylycz, M ;
Wallace, JC ;
Dorschner, MO ;
McArthur, M ;
Stamatoyannopoulos, JA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (13) :4537-4542
[17]   ATP-dependent chromatin remodeling factors: Nucleosome shufflers with many missions [J].
Varga-Weisz, P .
ONCOGENE, 2001, 20 (24) :3076-3085