共 16 条
Picking a winner: new mechanistic insights into the design of effective siRNAs
被引:28
作者:

Gong, DQ
论文数: 0 引用数: 0
h-index: 0
机构: Stanford Univ, Sch Med, Dept Mol Pharmacol, Stanford, CA 94305 USA

Ferrell, JE
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Dept Mol Pharmacol, Stanford, CA 94305 USA Stanford Univ, Sch Med, Dept Mol Pharmacol, Stanford, CA 94305 USA
机构:
[1] Stanford Univ, Sch Med, Dept Mol Pharmacol, Stanford, CA 94305 USA
[2] Stanford Univ, Dept Biol Sci, Stanford, CA 94305 USA
关键词:
D O I:
10.1016/j.tibtech.2004.07.008
中图分类号:
Q81 [生物工程学(生物技术)];
Q93 [微生物学];
学科分类号:
071005 ;
0836 ;
090102 ;
100705 ;
摘要:
Recent work has shown that the efficacy of a small interfering RNA [siRNA) for silencing gene expression is a function of how easy it is to unwind the siRNA from the 5'-antisense end. Based on these insights, one group has designed an algorithm that substantially improves the odds of picking an effective siRNA, and two groups have shown that 'forked' or 'frayed' siRNAs, which should be easier to unwind from the W-antisense end, are more effective than conventional siRNAs. These strategies represent important steps towards the rational design of effective siRNAs.
引用
收藏
页码:451 / 454
页数:4
相关论文
共 16 条
[1]
Lentiviral-mediated RNA interference
[J].
Abbas-Terki, T
;
Blanco-Bose, W
;
Déglon, N
;
Pralong, W
;
Aebischer, P
.
HUMAN GENE THERAPY,
2002, 13 (18)
:2197-2201

Abbas-Terki, T
论文数: 0 引用数: 0
h-index: 0
机构:
Ecole Polytech Fed Lausanne, Swiss Fed Inst Technol, Inst Neurosci, CH-1015 Lausanne, Switzerland Ecole Polytech Fed Lausanne, Swiss Fed Inst Technol, Inst Neurosci, CH-1015 Lausanne, Switzerland

Blanco-Bose, W
论文数: 0 引用数: 0
h-index: 0
机构:
Ecole Polytech Fed Lausanne, Swiss Fed Inst Technol, Inst Neurosci, CH-1015 Lausanne, Switzerland Ecole Polytech Fed Lausanne, Swiss Fed Inst Technol, Inst Neurosci, CH-1015 Lausanne, Switzerland

Déglon, N
论文数: 0 引用数: 0
h-index: 0
机构:
Ecole Polytech Fed Lausanne, Swiss Fed Inst Technol, Inst Neurosci, CH-1015 Lausanne, Switzerland Ecole Polytech Fed Lausanne, Swiss Fed Inst Technol, Inst Neurosci, CH-1015 Lausanne, Switzerland

Pralong, W
论文数: 0 引用数: 0
h-index: 0
机构:
Ecole Polytech Fed Lausanne, Swiss Fed Inst Technol, Inst Neurosci, CH-1015 Lausanne, Switzerland Ecole Polytech Fed Lausanne, Swiss Fed Inst Technol, Inst Neurosci, CH-1015 Lausanne, Switzerland

Aebischer, P
论文数: 0 引用数: 0
h-index: 0
机构:
Ecole Polytech Fed Lausanne, Swiss Fed Inst Technol, Inst Neurosci, CH-1015 Lausanne, Switzerland Ecole Polytech Fed Lausanne, Swiss Fed Inst Technol, Inst Neurosci, CH-1015 Lausanne, Switzerland
[2]
A system for stable expression of short interfering RNAs in mammalian cells
[J].
Brummelkamp, TR
;
Bernards, R
;
Agami, R
.
SCIENCE,
2002, 296 (5567)
:550-553

Brummelkamp, TR
论文数: 0 引用数: 0
h-index: 0
机构: Netherlands Canc Inst, Div Mol Carcinogenesis, NL-1066 CX Amsterdam, Netherlands

Bernards, R
论文数: 0 引用数: 0
h-index: 0
机构: Netherlands Canc Inst, Div Mol Carcinogenesis, NL-1066 CX Amsterdam, Netherlands

Agami, R
论文数: 0 引用数: 0
h-index: 0
机构: Netherlands Canc Inst, Div Mol Carcinogenesis, NL-1066 CX Amsterdam, Netherlands
[3]
RNA interference is mediated by 21-and 22-nucleotide RNAs
[J].
Elbashir, SM
;
Lendeckel, W
;
Tuschl, T
.
GENES & DEVELOPMENT,
2001, 15 (02)
:188-200

Elbashir, SM
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany

Lendeckel, W
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany

Tuschl, T
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany
[4]
Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells
[J].
Elbashir, SM
;
Harborth, J
;
Lendeckel, W
;
Yalcin, A
;
Weber, K
;
Tuschl, T
.
NATURE,
2001, 411 (6836)
:494-498

Elbashir, SM
论文数: 0 引用数: 0
h-index: 0
机构: Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37033 Gottingen, Germany

Harborth, J
论文数: 0 引用数: 0
h-index: 0
机构: Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37033 Gottingen, Germany

Lendeckel, W
论文数: 0 引用数: 0
h-index: 0
机构: Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37033 Gottingen, Germany

Yalcin, A
论文数: 0 引用数: 0
h-index: 0
机构: Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37033 Gottingen, Germany

Weber, K
论文数: 0 引用数: 0
h-index: 0
机构: Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37033 Gottingen, Germany

Tuschl, T
论文数: 0 引用数: 0
h-index: 0
机构: Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37033 Gottingen, Germany
[5]
Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate
[J].
Elbashir, SM
;
Martinez, J
;
Patkaniowska, A
;
Lendeckel, W
;
Tuschl, T
.
EMBO JOURNAL,
2001, 20 (23)
:6877-6888

Elbashir, SM
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany

Martinez, J
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany

Patkaniowska, A
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany

Lendeckel, W
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany

Tuschl, T
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany
[6]
Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
[J].
Fire, A
;
Xu, SQ
;
Montgomery, MK
;
Kostas, SA
;
Driver, SE
;
Mello, CC
.
NATURE,
1998, 391 (6669)
:806-811

Fire, A
论文数: 0 引用数: 0
h-index: 0
机构: Carnegie Inst Washington, Dept Embryol, Baltimore, MD 21210 USA

Xu, SQ
论文数: 0 引用数: 0
h-index: 0
机构: Carnegie Inst Washington, Dept Embryol, Baltimore, MD 21210 USA

Montgomery, MK
论文数: 0 引用数: 0
h-index: 0
机构: Carnegie Inst Washington, Dept Embryol, Baltimore, MD 21210 USA

Kostas, SA
论文数: 0 引用数: 0
h-index: 0
机构: Carnegie Inst Washington, Dept Embryol, Baltimore, MD 21210 USA

Driver, SE
论文数: 0 引用数: 0
h-index: 0
机构: Carnegie Inst Washington, Dept Embryol, Baltimore, MD 21210 USA

Mello, CC
论文数: 0 引用数: 0
h-index: 0
机构: Carnegie Inst Washington, Dept Embryol, Baltimore, MD 21210 USA
[7]
RNA interference
[J].
Hannon, GJ
.
NATURE,
2002, 418 (6894)
:244-251

Hannon, GJ
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
[8]
Enhancement of RNAi activity by improved siRNA duplexes
[J].
Hohjoh, H
.
FEBS LETTERS,
2004, 557 (1-3)
:193-198

Hohjoh, H
论文数: 0 引用数: 0
h-index: 0
机构:
Natl Inst Neurosci, NCNP, Kodaira, Tokyo 1878502, Japan Natl Inst Neurosci, NCNP, Kodaira, Tokyo 1878502, Japan
[9]
A microRNA in a multiple-turnover RNAi enzyme complex
[J].
Hutvágner, G
;
Zamore, PD
.
SCIENCE,
2002, 297 (5589)
:2056-2060

Hutvágner, G
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Massachusetts, Sch Med, Dept Mol Pharmacol & Biochem, Worcester, MA 01605 USA Univ Massachusetts, Sch Med, Dept Mol Pharmacol & Biochem, Worcester, MA 01605 USA

Zamore, PD
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Massachusetts, Sch Med, Dept Mol Pharmacol & Biochem, Worcester, MA 01605 USA Univ Massachusetts, Sch Med, Dept Mol Pharmacol & Biochem, Worcester, MA 01605 USA
[10]
Expression profiling reveals off-target gene regulation by RNAi
[J].
Jackson, AL
;
Bartz, SR
;
Schelter, J
;
Kobayashi, SV
;
Burchard, J
;
Mao, M
;
Li, B
;
Cavet, G
;
Linsley, PS
.
NATURE BIOTECHNOLOGY,
2003, 21 (06)
:635-637

Jackson, AL
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Inpharmat LLC, Kirkland, WA 98034 USA Rosetta Inpharmat LLC, Kirkland, WA 98034 USA

Bartz, SR
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Inpharmat LLC, Kirkland, WA 98034 USA Rosetta Inpharmat LLC, Kirkland, WA 98034 USA

Schelter, J
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Inpharmat LLC, Kirkland, WA 98034 USA Rosetta Inpharmat LLC, Kirkland, WA 98034 USA

Kobayashi, SV
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Inpharmat LLC, Kirkland, WA 98034 USA Rosetta Inpharmat LLC, Kirkland, WA 98034 USA

Burchard, J
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Inpharmat LLC, Kirkland, WA 98034 USA Rosetta Inpharmat LLC, Kirkland, WA 98034 USA

Mao, M
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Inpharmat LLC, Kirkland, WA 98034 USA Rosetta Inpharmat LLC, Kirkland, WA 98034 USA

Li, B
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Inpharmat LLC, Kirkland, WA 98034 USA Rosetta Inpharmat LLC, Kirkland, WA 98034 USA

Cavet, G
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Inpharmat LLC, Kirkland, WA 98034 USA Rosetta Inpharmat LLC, Kirkland, WA 98034 USA

Linsley, PS
论文数: 0 引用数: 0
h-index: 0
机构:
Rosetta Inpharmat LLC, Kirkland, WA 98034 USA Rosetta Inpharmat LLC, Kirkland, WA 98034 USA