Intricate knots in proteins: Function and evolution

被引:288
作者
Virnau, Peter [1 ]
Mirny, Leonid A.
Kardar, Mehran
机构
[1] MIT, Dept Phys, Cambridge, MA 02139 USA
[2] MIT, Harvard Mit Div Hlth Sci & Technol, Cambridge, MA 02139 USA
关键词
D O I
10.1371/journal.pcbi.0020122
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Our investigation of knotted structures in the Protein Data Bank reveals the most complicated knot discovered to date. We suggest that the occurrence of this knot in a human ubiquitin hydrolase might be related to the role of the enzyme in protein degradation. While knots are usually preserved among homologues, we also identify an exception in a transcarbamylase. This allows us to exemplify the function of knots in proteins and to suggest how they may have been created.
引用
收藏
页码:1074 / 1079
页数:6
相关论文
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