Optimal adaptive performance and delocalization in NK fitness landscapes

被引:28
作者
Campos, PRA
Adami, C
Wilke, CO
机构
[1] CALTECH, Digital Life Lab, Pasadena, CA 91125 USA
[2] CALTECH, Jet Prop Lab, Pasadena, CA 91125 USA
[3] Univ Sao Paulo, Inst Fis Sao Carlos, BR-13560970 Sao Carlos, SP, Brazil
基金
巴西圣保罗研究基金会; 美国国家科学基金会;
关键词
NK landscapes; error threshold; quasispecies; delocalization transition;
D O I
10.1016/S0378-4371(01)00572-6
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
We investigate the evolutionary dynamics of a finite population of sequences adapting to NK fitness landscapes. We find that. unlike in the case of an infinite population, the average fitness in a finite population is maximized at a small but finite, rather than vanishing, mutation rate. The highest local maxima in the landscape are visited for even larger mutation rates. close to a transition point at which the population delocalizes (i.e.. leaves the fitness peak at which it was localized) and starts traversing the sequence space. If the mutation rate is increased even further, the population undergoes a second transition and loses all sensitivity to fitness peaks. This second transition corresponds to the standard error threshold transition first described by Eigen. We discuss the implications of our results for biological evolution and for evolutionary optimization techniques. (C) 2002 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:495 / 506
页数:12
相关论文
共 38 条
[1]  
Adami C, 1998, Introduction to Artificial Life
[2]   Error threshold in the evolution of diploid organisms [J].
Alves, D ;
Fontanari, JF .
JOURNAL OF PHYSICS A-MATHEMATICAL AND GENERAL, 1997, 30 (08) :2601-2607
[3]   ERROR THRESHOLDS ON CORRELATED FITNESS LANDSCAPES [J].
BONHOEFFER, S ;
STADLER, PF .
JOURNAL OF THEORETICAL BIOLOGY, 1993, 164 (03) :359-372
[4]   Finite-size scaling of the error threshold transition in finite populations [J].
Campos, PRA ;
Fontanari, JF .
JOURNAL OF PHYSICS A-MATHEMATICAL AND GENERAL, 1999, 32 (01) :L1-L7
[5]   Finite-size scaling of the quasispecies model [J].
Campos, PRA ;
Fontanari, JF .
PHYSICAL REVIEW E, 1998, 58 (02) :2664-2667
[6]   EVOLUTION IN A FLAT FITNESS LANDSCAPE [J].
DERRIDA, B ;
PELITI, L .
BULLETIN OF MATHEMATICAL BIOLOGY, 1991, 53 (03) :355-382
[7]   RANDOM-ENERGY MODEL - AN EXACTLY SOLVABLE MODEL OF DISORDERED-SYSTEMS [J].
DERRIDA, B .
PHYSICAL REVIEW B, 1981, 24 (05) :2613-2626
[8]   Mutation rates among RNA viruses [J].
Drake, JW ;
Holland, JJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (24) :13910-13913
[9]   A CONSTANT RATE OF SPONTANEOUS MUTATION IN DNA-BASED MICROBES [J].
DRAKE, JW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (16) :7160-7164
[10]  
EIGEN M, 1986, CHEM SCRIPTA, V26B, P13