Global Analysis of Extracytoplasmic Stress Signaling in Escherichia coli

被引:190
作者
Bury-Mone, Stephanie [1 ]
Nomane, Yanoura [1 ]
Reymond, Nancie [2 ]
Barbet, Romain [3 ]
Jacquet, Eric [3 ]
Imbeaud, Sandrine [2 ]
Jacq, Annick [1 ]
Bouloc, Philippe [1 ]
机构
[1] Univ Paris 11, Inst Genet & Microbiol, Lab Signalisat & Reseaux Regulat Bacteriens, CNRS,UMR8621, F-91405 Orsay, France
[2] Univ Paris 11, Ctr Genet Mol, CNRS UPR2167, Gif Orsay DNA Microarray Platform GODMAP, Gif Sur Yvette, France
[3] CNRS, Inst Chim Subst Nat, UPR2301, IMAGIF qPCR Platform, Gif Sur Yvette, France
来源
PLOS GENETICS | 2009年 / 5卷 / 09期
关键词
SHOCK-PROTEIN RESPONSE; 2-COMPONENT REGULATORY SYSTEM; OUTER-MEMBRANE PROTEINS; GENOME-WIDE ANALYSES; SMALL NONCODING RNAS; DNAJ-LIKE PROTEIN; RCS PHOSPHORELAY; SIGMA(E) REGULON; GENE-EXPRESSION; CELL-ENVELOPE;
D O I
10.1371/journal.pgen.1000651
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The Bae, Cpx, Psp, Rcs, and sigma(E) pathways constitute the Escherichia coli signaling systems that detect and respond to alterations of the bacterial envelope. Contributions of these systems to stress response have previously been examined individually; however, the possible interconnections between these pathways are unknown. Here we investigate the dynamics between the five stress response pathways by determining the specificities of each system with respect to signal-inducing conditions, and monitoring global transcriptional changes in response to transient overexpression of each of the effectors. Our studies show that different extracytoplasmic stress conditions elicit a combined response of these pathways. Involvement of the five pathways in the various tested stress conditions is explained by our unexpected finding that transcriptional responses induced by the individual systems show little overlap. The extracytoplasmic stress signaling pathways in E. coli thus regulate mainly complementary functions whose discrete contributions are integrated to mount the full adaptive response.
引用
收藏
页数:17
相关论文
共 100 条
[91]   Small non-coding RNAs and the bacterial outer membrane [J].
Vogel, Joerg ;
Papenfort, Kai .
CURRENT OPINION IN MICROBIOLOGY, 2006, 9 (06) :605-611
[92]   The Tol/Pal system function requires an interaction between the C-terminal domain of TolA and the N-terminal domain of TolB [J].
Walburger, A ;
Lazdunski, C ;
Corda, Y .
MOLECULAR MICROBIOLOGY, 2002, 44 (03) :695-708
[93]   OMP peptide signals initiate the envelope-stress response by activating DegS protease via relief of inhibition mediated by its PDZ domain [J].
Walsh, NP ;
Alba, BM ;
Bose, B ;
Gross, CA ;
Sauer, RT .
CELL, 2003, 113 (01) :61-71
[94]   STRESS-INDUCED EXPRESSION OF THE ESCHERICHIA-COLI PHAGE SHOCK PROTEIN OPERON IS DEPENDENT ON SIGMA-54 AND MODULATED BY POSITIVE AND NEGATIVE FEEDBACK MECHANISMS [J].
WEINER, L ;
BRISSETTE, JL ;
MODEL, P .
GENES & DEVELOPMENT, 1991, 5 (10) :1912-1923
[95]   Crystal structure of the DegS stress sensor: How a PDZ domain recognizes misfolded protein and activates a protease [J].
Wilken, C ;
Kitzing, K ;
Kurzbauer, R ;
Ehrmann, M ;
Clausen, T .
CELL, 2004, 117 (04) :483-494
[96]   Signal integration by the two-component signal transduction response regulator CpxR [J].
Wolfe, Alan J. ;
Parikh, Niyati ;
Lima, Bruno P. ;
Zemaitaitis, Bozena .
JOURNAL OF BACTERIOLOGY, 2008, 190 (07) :2314-2322
[97]   Transcriptional response of Escherichia coli to external copper [J].
Yamamoto, K ;
Ishihama, A .
MOLECULAR MICROBIOLOGY, 2005, 56 (01) :215-227
[98]   Involvement of multiple transcription factors for metal-induced spy gene expression in Escherichia coli [J].
Yamamoto, Kaneyoshi ;
Ogasawarab, Hiroshi ;
Ishihama, Akira .
JOURNAL OF BIOTECHNOLOGY, 2008, 133 (02) :196-200
[99]   Characterization of copper-inducible promoters regulated by CpxA/CpxR in Escherichia coli [J].
Yamamoto, Kaneyoshi ;
Ishihama, Akira .
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 2006, 70 (07) :1688-1695
[100]   The R1 conjugative plasmid increases Escherichia coli biofilm formation through an envelope stress response [J].
Yang, Xiaole ;
Ma, Qun ;
Wood, Thomas K. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2008, 74 (09) :2690-2699