Adenine and 2-aminopurine:: Paradigms of modern theoretical photochemistry

被引:254
作者
Serrano-Andres, Luis
Merchan, Manuela
Borin, Antonio C.
机构
[1] Univ Valencia, Inst Ciencia Mol, ES-46100 Valencia, Spain
[2] Univ Sao Paulo, Inst Quim, BR-05508900 Sao Paulo, Brazil
关键词
conical intersections; DNA photophysics; fluorescence quenching; quantum chemistry; ultrafast decay;
D O I
10.1073/pnas.0602991103
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Distinct photophysical behavior of nucleobase adenine and its constitutional isomer, 2-aminopurine, has been studied by using quantum chemical methods, in particular an accurate ab initio multiconfigurational second-order perturbation theory. After light irradiation, the efficient, ultrafast energy dissipation observed for nonfluorescent 9H-adenine is explained here by the nonradiative internal conversion process taking place along a barrieriess reaction path from the initially populated (1)(pi pi*L-a) excited state toward a low-lying conical intersection (CI) connected with the ground state. In contrast, the strong fluorescence recorded for 2-aminopurine at 4.0 eV with large decay lifetime is interpreted by the presence of a minimum in the (1)(pi pi*L-a) hypersurface lying below the lowest CI and the subsequent potential energy barrier required to reach the funnel to the ground state. Secondary deactivation channels were found in the two systems related to additional CIs involving the (1)(pi pi*L-b) and (1)(n pi*) states. Although in 9H-adenine a population switch between both states is proposed, in 7H-adenine this may be perturbed by a relatively larger barrier to access the (1)(n pi*) state, and, therefore, the (1)(pi pi*L-b) state becomes responsible for the weak fluorescence measured in aqueous adenine at approximate to 4.5 eV. In contrast to previous models that explained fluorescence quenching in adenine, unlike in 2-aminopurine, on the basis of the vibronic coupling of the nearby (1)(pi pi*) and (1)(n pi*) states, the present results indicate that the 1(n pi*) state does not contribute to the leading photophysical event and establish the prevalence of a model based on the CI concept in modern photochemistry.
引用
收藏
页码:8691 / 8696
页数:6
相关论文
共 74 条
[41]  
Merchán M, 2005, THEOR COMPU CHEM, V16, P35
[42]   POLARIZED FLUORESCENCE FROM THE THYMINE FAMILY OF DNA BASES IN NEUTRAL AQUEOUS-SOLUTION AT ALMOST-EQUAL-TO 300-K [J].
MORGAN, JP ;
DANIELS, M .
CHEMICAL PHYSICS LETTERS, 1979, 67 (2-3) :533-537
[43]   Evidence of tautomerism in 2-aminopurine from fluorescence lifetime measurements [J].
Neely, RK ;
Magennis, SW ;
Dryden, DTF ;
Jones, AC .
JOURNAL OF PHYSICAL CHEMISTRY B, 2004, 108 (45) :17606-17610
[44]   Properties of isolated DNA bases, base pairs and nucleosides examined by laser spectroscopy [J].
Nir, E ;
Plützer, C ;
Kleinermanns, K ;
de Vries, M .
EUROPEAN PHYSICAL JOURNAL D, 2002, 20 (03) :317-329
[45]   On the photochemistry of purine nucleobases [J].
Nir, E ;
Kleinermanns, K ;
Grace, L ;
de Vries, MS .
JOURNAL OF PHYSICAL CHEMISTRY A, 2001, 105 (21) :5106-5110
[46]   STRUCTURE AND DYNAMICS OF A FLUORESCENT DNA OLIGOMER CONTAINING THE ECORI RECOGNITION SEQUENCE - FLUORESCENCE, MOLECULAR-DYNAMICS, AND NMR-STUDIES [J].
NORDLUND, TM ;
ANDERSSON, S ;
NILSSON, L ;
RIGLER, R ;
GRASLUND, A ;
MCLAUGHLIN, LW .
BIOCHEMISTRY, 1989, 28 (23) :9095-9103
[47]   2-aminopurine:: A probe of structural dynamics and charge transfer in DNA and DNA:RNA hybrids [J].
O'Neill, MA ;
Barton, JK .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (44) :13053-13066
[48]  
Olivucci M, 2005, THEOR COMPU CHEM, V16, P1
[49]   Ultrafast decay and hydration dynamics of DNA bases and mimics [J].
Pal, SK ;
Peon, J ;
Zewail, AH .
CHEMICAL PHYSICS LETTERS, 2002, 363 (1-2) :57-63
[50]   Ultrafast internal conversion of electronically excited RNA and DNA nucleosides in water [J].
Pecourt, JML ;
Peon, J ;
Kohler, B .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2000, 122 (38) :9348-9349