Three views of microbial genomes

被引：45

作者：

Jensen, LJ ^{[1
]}

Friis, C ^{[1
]}

Ussery, DW ^{[1
]}

机构：

[1] Tech Univ Denmark, Dept Biotechnol, Ctr Biol Sequence Anal, DK-2800 Lyngby, Denmark

来源：

RESEARCH IN MICROBIOLOGY | 1999年 / 150卷 / 9-10期

关键词：

complete genome; repetitive DNA; DNA structure; base composition; Mycoplasma genitalium;

D O I：

10.1016/S0923-2508(99)00116-3

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

We describe here GenomeAtlases as a method for visualising three different aspects of complete microbial chromosomes: repeats, DNA structural characteristics, and base composition. We have applied this method to all publicly available genomes, and find a general strand preference of global repeats. The atlas for the Mycoplasma genitalium genome is presented as an example, and results from all three views are consistent with known characteristics of the genome. (C) 1999 Editions scientifiques et medicales Elsevier SAS.

引用

页码：773 / 777

页数：5

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