Water structure and interactions with protein surfaces

被引:217
作者
Raschke, TM [1 ]
机构
[1] Stanford Univ, James H Clark Ctr, Stanford, CA 94305 USA
关键词
D O I
10.1016/j.sbi.2006.03.002
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The structure of liquid water and its interaction with biological molecules is a very active area of experimental and theoretical research. The chemically complex surfaces of protein molecules alter the structure of the surrounding layer of hydrating water molecules. The dynamics of hydration water can be detected by a series of experimental techniques, which show that hydration waters typically have slower correlation times than water in bulk. Specific water-mediated interactions in protein complexes have been studied in detail, and these interactions have been incorporated into potential energy functions for protein folding and design. The subtle changes in the structure of hydration water have been investigated by theoretical studies.
引用
收藏
页码:152 / 159
页数:8
相关论文
共 65 条
[61]   The structure of the first coordination shell in liquid water [J].
Wernet, P ;
Nordlund, D ;
Bergmann, U ;
Cavalleri, M ;
Odelius, M ;
Ogasawara, H ;
Näslund, LÅ ;
Hirsch, TK ;
Ojamäe, L ;
Glatzel, P ;
Pettersson, LGM ;
Nilsson, A .
SCIENCE, 2004, 304 (5673) :995-999
[62]  
WESTHOF E, 1988, ANNU REV BIOPHYS BIO, V17, P125
[63]   Water's hydrogen bonds in the hydrophobic effect: A simple model [J].
Xu, HF ;
Dill, KA .
JOURNAL OF PHYSICAL CHEMISTRY B, 2005, 109 (49) :23611-23617
[64]   Hydrophobic tendency of polar group hydration as a major force in type I antifreeze protein recognition [J].
Yang, C ;
Sharp, KA .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2005, 59 (02) :266-274
[65]   Hydrophobic collapse in multidomain protein folding [J].
Zhou, RH ;
Huang, XH ;
Margulis, CJ ;
Berne, BJ .
SCIENCE, 2004, 305 (5690) :1605-1609