Radical enzymes in anaerobes

被引:132
作者
Buckel, Wolfgang [1 ]
Golding, Bernard T.
机构
[1] Univ Marburg, Fac Biol, D-35032 Marburg, Germany
[2] Newcastle Univ, Sch Nat Sci Chem, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
关键词
coenzyme B-12; S-adenosylmethionine; glycyl radical; ketyl radical anion; dehydratases;
D O I
10.1146/annurev.micro.60.080805.142216
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
This review describes enzymes that contain radicals and/or catalyze reactions with radical intermediates. Because radicals irreversibly react with dioxygen, most of these enzymes occur in anaerobic bacteria and archaea. Exceptions are the families of coenzyme B-12- and S-adenosylmethionine (SAM)-dependent radical enzymes, of which some members also occur in aerobes. Especially oxygen-sensitive radical enzymes are the glycyl radical enzymes and 2-hydroxyacyl-CoA dehydratases. The latter are activated by an ATP-dependent one-electron transfer and act via a ketyl radical anion mechanism. Related enzymes are the ATP-dependent benzoyl-CoA reductase and the ATP-independent 4-hydroxybenzoyl-CoA reductase. Ketyl radical anions may also be generated by one-electron oxidation as shown by the flavin-adenine-dinucleotide (FAD)- and [4Fe-4S]-containing 4-hydroxybutyryl-CoA dehydratase. Finally, two radical enzymes are discussed, pyruvate:ferredoxin oxidoreductase and methane-forming methyl-CoM reductase, which catalyze their main reaction in two-electron steps, but subsequent electron transfers proceed via radicals.
引用
收藏
页码:27 / 49
页数:23
相关论文
共 115 条
[41]  
CORNFORTH JW, 1959, J LIPID RES, V1, P3
[42]   TOWARDS THE UNIFICATION OF COENZYME-B12-DEPENDENT DIOL DEHYDRATASE STEREOCHEMICAL AND MODEL STUDIES - THE BOUND RADICAL MECHANISM [J].
FINKE, RG ;
SCHIRALDI, DA ;
MAYER, BJ .
COORDINATION CHEMISTRY REVIEWS, 1984, 54 (FEB) :1-22
[43]   COENZYME ADOB12 VS ADOB12.- HOMOLYTIC CO-C CLEAVAGE FOLLOWING ELECTRON-TRANSFER - A RATE ENHANCEMENT GREATER-THAN-OR-EQUAL-TO-10(12) [J].
FINKE, RG ;
MARTIN, BD .
JOURNAL OF INORGANIC BIOCHEMISTRY, 1990, 40 (01) :19-22
[44]   Deoxyribonucleotide synthesis in anaerobic microorganisms: The class III ribonucleotide reductase [J].
Fontecave, M ;
Mulliez, E ;
Logan, DT .
PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 72, 2002, 72 :95-127
[45]  
Fontecave M., 1999, Chemistry and biochemistry of B12., P731
[46]  
Frey P. A., 1999, Chemistry and biochemistry of B12., P835
[47]   S-Adenosylmethionine:: A wolf in sheep's clothing, or a rich man's adenosylcobalamin? [J].
Frey, PA ;
Magnusson, OT .
CHEMICAL REVIEWS, 2003, 103 (06) :2129-2148
[48]   Radical mechanisms of enzymatic catalysis [J].
Frey, PA .
ANNUAL REVIEW OF BIOCHEMISTRY, 2001, 70 :121-148
[49]   Reconstitution of light-independent protochlorophyllide reductase from purified Bch1 and BchN-BchB subunits -: In vitro confirmation of nitrogenase-like features of a bacteriochlorophyll biosynthesis enzyme [J].
Fujita, Y ;
Bauer, CE .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (31) :23583-23588
[50]   Acyl-CoA dehydrogenases - A mechanistic overview [J].
Ghisla, S ;
Thorpe, C .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 2004, 271 (03) :494-508