Three-dimensional structure of a DNA repair enzyme, 3-methyladenine DNA glycosylase II, from Escherichia coli

被引:130
作者
Yamagata, Y [1 ]
Kato, M [1 ]
Odawara, K [1 ]
Tokuno, Y [1 ]
Nakashima, Y [1 ]
Matsushima, N [1 ]
Yasumura, K [1 ]
Tomita, K [1 ]
Ihara, K [1 ]
Fujii, Y [1 ]
Nakabeppu, Y [1 ]
Sekiguchi, M [1 ]
Fujii, S [1 ]
机构
[1] KYUSHU UNIV,MED INST BIOREGULAT,HIGASHI KU,FUKUOKA 812,JAPAN
关键词
D O I
10.1016/S0092-8674(00)80102-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The three-dimensional structure of Escherichia coli 3-methyladenine DNA glycosylase II, which removes numerous alkylated bases from DNA, was solved at 2.3 Angstrom resolution. The enzyme consists of three domains: one alpha + beta fold domain with a similarity to one-half of the eukaryotic TATA box-binding protein, and two all alpha-helical domains similar to those of Escherichia coli endonuclease III with combined N-glycosylase/abasic lyase activity. Mutagenesis and model-building studies suggest that the active site is located in a cleft between the two helical domains and that the enzyme flips the target base out of the DNA duplex into the active-site cleft. The structure of the active site implies broad substrate specificity and simple N-glycosylase activity.
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收藏
页码:311 / 319
页数:9
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