Constitutive heterochromatin: a surprising variety of expressed sequences

被引:43
作者
Dimitri, Patrizio [1 ,2 ]
Caizzi, Ruggiero [3 ]
Giordano, Ennio [4 ]
Accardo, Maria Carmela [1 ,2 ]
Lattanzi, Giovanna [5 ]
Biamonti, Giuseppe [6 ]
机构
[1] Univ Roma La Sapienza, Lab Genom Funz & Prote Sistemi Modello, Dipartimento Genet & Biol Mol Charles Darwin, I-00185 Rome, Italy
[2] Univ Roma La Sapienza, Ist Pasteur, Dipartimento Genet & Biol Mol Charles Darwin, Fdn Bolognetti, I-00185 Rome, Italy
[3] Univ Bari, Dipartimento Genet & Microbiol, I-70126 Bari, Italy
[4] Univ Naples Federico II, Dipartimento Genet Biol Gen & Mol, I-80100 Naples, Italy
[5] IOR, Ist Genet Mol, Unit Bologna, I-40136 Bologna, Italy
[6] Ist Genet Mol, I-27100 Pavia, Italy
关键词
DROSOPHILA-MELANOGASTER ENCODES; HUTCHINSON-GILFORD-PROGERIA; H3; LYSINE-9; METHYLATION; GENETIC-ANALYSIS; TRANSPOSABLE ELEMENTS; Y-CHROMOSOME; CENTROMERIC HETEROCHROMATIN; CENTRIC HETEROCHROMATIN; CYTOGENETIC ANALYSIS; NIPPED-B;
D O I
10.1007/s00412-009-0211-y
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The organization of chromosomes into euchromatin and heterochromatin is amongst the most important and enigmatic aspects of genome evolution. Constitutive heterochromatin is a basic yet still poorly understood component of eukaryotic chromosomes, and its molecular characterization by means of standard genomic approaches is intrinsically difficult. Although recent evidence indicates that the presence of transcribed genes in constitutive heterochromatin is a conserved trait that accompanies the evolution of eukaryotic genomes, the term heterochromatin is still considered by many as synonymous of gene silencing. In this paper, we comprehensively review data that provide a clearer picture of transcribed sequences within constitutive heterochromatin, with a special emphasis on Drosophila and humans.
引用
收藏
页码:419 / 435
页数:17
相关论文
共 123 条
[91]  
RASOOLY RS, 1991, GENETICS, V129, P119
[92]   Small RNAs correspond to centromere heterochromatic repeats [J].
Reinhart, BJ ;
Bartel, DP .
SCIENCE, 2002, 297 (5588) :1831-1831
[93]   A systematic analysis of human disease-associated gene sequences in Drosophila melanogaster [J].
Reiter, LT ;
Potocki, L ;
Chien, S ;
Gribskov, M ;
Bier, E .
GENOME RESEARCH, 2001, 11 (06) :1114-1125
[94]   LOCALIZATION OF DNA COMPLEMENTARY TO RIBOSOMAL RNA IN NUCLEOLUS ORGANIZER REGION OF DROSOPHILA MELANOGASTER [J].
RITOSSA, FM ;
SPIEGELMAN, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1965, 53 (04) :737-+
[95]   Transcriptional activation of a constitutive heterochromatic domain of the human genome in response to heat shock [J].
Rizzi, N ;
Denegri, M ;
Chiodi, I ;
Corioni, M ;
Valgardsdottir, R ;
Cobianchi, F ;
Riva, S ;
Biamonti, G .
MOLECULAR BIOLOGY OF THE CELL, 2004, 15 (02) :543-551
[96]  
Rollins RA, 1999, GENETICS, V152, P577
[97]   Cytogenetic and molecular characterization of heterochromatin gene models in Drosophila melanogaster [J].
Rossi, Fabrizio ;
Moschetti, Roberta ;
Caizzi, Ruggiero ;
Corradini, Nicoletta ;
Dimitri, Patrizio .
GENETICS, 2007, 175 (02) :595-607
[98]   Reversal of the cellular phenotype in the premature aging disease Hutchinson-Gilford progeria syndrome [J].
Scaffidi, P ;
Misteli, T .
NATURE MEDICINE, 2005, 11 (04) :440-445
[99]   A genetic and molecular characterization of two proximal heterochromatic genes on chromosome 3 of Drosophila melanogaster [J].
Schulze, SR ;
Sinclair, DAR ;
Fitzpatrick, KA ;
Honda, BM .
GENETICS, 2005, 169 (04) :2165-2177
[100]   The structure and evolution of centromeric transition regions within the human genome [J].
She, XW ;
Horvath, JE ;
Jiang, ZS ;
Liu, G ;
Furey, TS ;
Christ, L ;
Clark, R ;
Graves, T ;
Gulden, CL ;
Alkan, C ;
Bailey, JA ;
Sahinalp, C ;
Rocchi, M ;
Haussler, D ;
Wilson, RK ;
Miller, W ;
Schwartz, S ;
Eichler, EE .
NATURE, 2004, 430 (7002) :857-864