Methods for mining HTS data

被引：38

作者：

Harper, Gavin ^{[1
]}

Pickett, Stephen D. ^{[1
]}

机构：

[1] GSK, Stevenage SG1 2NY, Herts, England

来源：

DRUG DISCOVERY TODAY | 2006年 / 11卷 / 15-16期

关键词：

D O I：

10.1016/j.drudis.2006.06.006

中图分类号：

R9 [药学];

学科分类号：

1007 ;

摘要：

Data mining is a fast-growing field that is finding application across a wide range of industries. HTS is a crucial part of the drug discovery process at most large pharmaceutical companies. Accurate analysis of HTS data is, therefore, vital to drug discovery. Given the large quantity of data generated during an HTS, and the importance of analyzing those data effectively, it is unsurprising that data-mining techniques are now increasingly applied to HTS data analysis. Taking a broad view of both the HTS process and the data-mining process, we review recent literature that describes the application of data-mining techniques to HTS data.

引用

收藏

页码：694 / 699

页数：6

相关论文

共 56 条

[21] The reduced graph descriptor in virtual screening and data-driven clustering of high-throughput screening data [J].

Harper, G ;

Bravi, GS ;

Pickett, SD ;

Hussain, J ;

Green, DVS .

JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2004, 44 (06) :2145-2156

[22] Design of a compound screening collection for use in high throughput screening [J].

Harper, G ;

Pickett, SD ;

Green, DVS .

COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING, 2004, 7 (01) :63-71

[23] Key aspects of the novartis compound collection enhancement project for the compilation of a comprehensive chemogenomics drug discovery screening collection [J].

Jacoby, E ;

Schuffenhauer, A ;

Popov, M ;

Azzaoui, K ;

Havill, B ;

Schopfer, U ;

Engeloch, C ;

Stanek, J ;

Acklin, P ;

Rigollier, P ;

Stoll, F ;

Koch, G ;

Meier, P ;

Orain, D ;

Giger, R ;

Hinrichs, J ;

Malagu, K ;

Zimmermann, J ;

Roth, HJ .

CURRENT TOPICS IN MEDICINAL CHEMISTRY, 2005, 5 (04) :397-411

[24]

KALOS A, 2005, P 11 ACM SIGKDD INT, P763

[25] Practical approaches to efficient screening: Information-rich screening protocol [J].

Karnachi, PS ;

Brown, FK .

JOURNAL OF BIOMOLECULAR SCREENING, 2004, 9 (08) :678-686

[26] Identifying biologically active compound classes using phenotypic screening data and sampling statistics [J].

Klekota, J ;

Brauner, E ;

Schreiber, SL .

JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2005, 45 (06) :1824-1836

[27] Medicinal chemistry tools: making sense of HTS data [J].

Kolossov, E ;

Lemon, A .

EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2006, 41 (02) :166-175

[28] Assessment of the consistency of medicinal chemists in reviewing sets of compounds [J].

Lajiness, MS ;

Maggiora, GM ;

Shanmugasundaram, V .

JOURNAL OF MEDICINAL CHEMISTRY, 2004, 47 (20) :4891-4896

[29]

LEACH AR, 2003, INTRO CHEMOINFORMATI, P53

[30]

Leach ARL, 2001, 221 NAT M AM CHEM SO

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