Mouse genome database 2016

被引:64
作者
Bult, Carol J. [1 ]
Eppig, Janan T. [1 ]
Blake, Judith A. [1 ]
Kadin, James A. [1 ]
Richardson, Joel E. [1 ]
机构
[1] Jackson Lab, 600 Main St, Bar Harbor, ME 04609 USA
关键词
GENE-FUNCTION; GENERATION; RESOURCE; BIOLOGY; INTEGRATION; WAREHOUSE;
D O I
10.1093/nar/gkv1211
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Mouse Genome Database (MGD; http://www.informatics.jax.org) is the primary community model organism database for the laboratory mouse and serves as the source for key biological reference data related to mouse genes, gene functions, phenotypes and disease models with a strong emphasis on the relationship of these data to human biology and disease. As the cost of genome-scale sequencing continues to decrease and new technologies for genome editing become widely adopted, the laboratory mouse is more important than ever as a model system for understanding the biological significance of human genetic variation and for advancing the basic research needed to support the emergence of genome-guided precision medicine. Recent enhancements to MGD include new graphical summaries of biological annotations for mouse genes, support for mobile access to the database, tools to support the annotation and analysis of sets of genes, and expanded support for comparative biology through the expansion of homology data.
引用
收藏
页码:D840 / D847
页数:8
相关论文
共 36 条
[1]  
Agarwala R, 2015, NUCLEIC ACIDS RES, V43, pD6, DOI [10.1093/nar/gku1130, 10.1093/nar/gkv1290]
[2]   YeastMine-an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit [J].
Balakrishnan, Rama ;
Park, Julie ;
Karra, Kalpana ;
Hitz, Benjamin C. ;
Binkley, Gail ;
Hong, Eurie L. ;
Sullivan, Julie ;
Micklem, Gos ;
Cherry, J. Michael .
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION, 2012,
[3]   The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse [J].
Blake, Judith A. ;
Bult, Carol J. ;
Eppig, Janan T. ;
Kadin, James A. ;
Richardson, Joel E. .
NUCLEIC ACIDS RESEARCH, 2014, 42 (D1) :D810-D817
[4]   The mammalian gene function resource: the international knockout mouse consortium [J].
Bradley, Allan ;
Anastassiadis, Konstantinos ;
Ayadi, Abdelkader ;
Battey, James F. ;
Bell, Cindy ;
Birling, Marie-Christine ;
Bottomley, Joanna ;
Brown, Steve D. ;
Buerger, Antje ;
Bult, Carol J. ;
Bushell, Wendy ;
Collins, Francis S. ;
Desaintes, Christian ;
Doe, Brendan ;
Economides, Aris ;
Eppig, Janan T. ;
Finnell, Richard H. ;
Fletcher, Colin ;
Fray, Martin ;
Frendewey, David ;
Friedel, Roland H. ;
Grosveld, Frank G. ;
Hansen, Jens ;
Herault, Yann ;
Hicks, Geoffrey ;
Hoerlein, Andreas ;
Houghton, Richard ;
de Angelis, Martin Hrabe ;
Huylebroeck, Danny ;
Iyer, Vivek ;
de Jong, Pieter J. ;
Kadin, James A. ;
Kaloff, Cornelia ;
Kennedy, Karen ;
Koutsourakis, Manousos ;
Lloyd, K. C. Kent ;
Marschall, Susan ;
Mason, Jeremy ;
McKerlie, Colin ;
McLeod, Michael P. ;
von Melchner, Harald ;
Moore, Mark ;
Mujica, Alejandro O. ;
Nagy, Andras ;
Nefedov, Mikhail ;
Nutter, Lauryl M. ;
Pavlovic, Guillaume ;
Peterson, Jane L. ;
Pollock, Jonathan ;
Ramirez-Solis, Ramiro .
MAMMALIAN GENOME, 2012, 23 (9-10) :580-586
[5]   The International Mouse Phenotyping Consortium: past and future perspectives on mouse phenotyping [J].
Brown, Steve D. M. ;
Moore, Mark W. .
MAMMALIAN GENOME, 2012, 23 (9-10) :632-640
[6]   The Mouse Genome Database (MGD): mouse biology and model systems [J].
Bult, Carol J. ;
Eppig, Janan T. ;
Kadin, James A. ;
Richardson, Joel E. ;
Blake, Judith A. .
NUCLEIC ACIDS RESEARCH, 2008, 36 :D724-D728
[7]   Mouse Tumor Biology (MTB): a database of mouse models for human cancer [J].
Bult, Carol J. ;
Krupke, Debra M. ;
Begley, Dale A. ;
Richardson, Joel E. ;
Neuhauser, Steven B. ;
Sundberg, John P. ;
Eppig, Janan T. .
NUCLEIC ACIDS RESEARCH, 2015, 43 (D1) :D818-D824
[8]   The Mouse Genome Database: enhancements and updates [J].
Bult, Carol J. ;
Kadin, James A. ;
Richardson, Joel E. ;
Blake, Judith A. ;
Eppig, Janan T. .
NUCLEIC ACIDS RESEARCH, 2010, 38 :D586-D592
[9]   Out of the bottleneck: the Diversity Outcross and Collaborative Cross mouse populations in behavioral genetics research [J].
Chesler, Elissa J. .
MAMMALIAN GENOME, 2014, 25 (1-2) :3-11
[10]   The diversity outbred mouse population [J].
Churchill, Gary A. ;
Gatti, Daniel M. ;
Munger, Steven C. ;
Svenson, Karen L. .
MAMMALIAN GENOME, 2012, 23 (9-10) :713-718