Complete genome of the mutualistic, N2-fixing grass endophyte Azoarcus sp strain BH72

被引:183
作者
Krause, Andrea
Ramakumar, Adarsh
Bartels, Daniela
Battistoni, Federico
Bekel, Thomas
Boch, Jens
Boehm, Melanie
Friedrich, Frauke
Hurek, Thomas
Krause, Lutz
Linke, Burkhard
McHardy, Alice C.
Sarkar, Abhijit
Schneiker, Susanne
Syed, Arshad Ali
Thauer, Rudolf
Vorhoelter, Frank-Joerg
Weidner, Stefan
Puehler, Alfred
Reinhold-Hurek, Barbara
Kaiser, Olaf
Goesmann, Alexander
机构
[1] Univ Bremen, Lab Gen Microbiol, D-28334 Bremen, Germany
[2] Univ Bielefeld, CeBiTec, D-33501 Bielefeld, Germany
[3] Univ Halle Wittenberg, Genet Inst, D-06120 Halle, Germany
[4] Univ Bielefeld, Lehrstuhl Genet, D-33501 Bielefeld, Germany
[5] Max Planck Inst Terr Microbiol, D-35043 Marburg, Germany
关键词
D O I
10.1038/nbt1243
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Azoarcus sp. strain BH72, a mutualistic endophyte of rice and other grasses, is of agrobiotechnological interest because it supplies biologically fixed nitrogen to its host and colonizes plants in remarkably high numbers without eliciting disease symptoms. The complete genome sequence is 4,376,040- bp long and contains 3,992 predicted protein- coding sequences. Genome comparison with the Azoarcus- related soil bacterium strain EbN1 revealed a surprisingly low degree of synteny. Coding sequences involved in the synthesis of surface components potentially important for plant- microbe interactions were more closely related to those of plant- associated bacteria. Strain BH72 appears to be 'disarmed' compared to plant pathogens, having only a few enzymes that degrade plant cell walls; it lacks type III and IV secretion systems, related toxins and an N- acyl homoserine lactones - based communication system. The genome contains remarkably few mobile elements, indicating a low rate of recent gene transfer that is presumably due to adaptation to a stable, low- stress microenvironment.
引用
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页码:1385 / 1391
页数:7
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