Genetic aspects of targeted insertion mutagenesis in yeasts

被引:33
作者
Klinner, U [1 ]
Schäfer, B [1 ]
机构
[1] Rhein Westfal TH Aachen, Inst Biol 4, D-52056 Aachen, Germany
关键词
yeasts; non-Saccharomyces yeasts; non-conventional yeasts; targeted insertion mutagenesis; gene disruption; gene replacement; biolistic bombardment;
D O I
10.1016/j.femsre.2003.10.002
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Targeted insertion mutagenesis is a main molecular tool of yeast science initially applied in Saccharomyces cerevisiae. The method was extended to fission yeast Schizosaccharomyces pombe and to "non-conventional" yeast species, which show specific properties of special interest to both basic and applied research. Consequently, the behaviour of such non-Saccharomyces yeasts is reviewed against the background of the knowledge of targeted insertion mutagenesis in S. cerevisiae. Data of homologous integration efficiencies obtained with circular, ends-in or ends-out vectors in several yeasts are compared. We follow details of targeted insertion mutagenesis in order to recognize possible rate-limiting steps. The route of the vector to the target and possible mechanisms of its integration into chromosomal genes are considered. Specific features of some yeast species are discussed. In addition, similar approaches based on homologous recombination that have been established for the mitochondrial genome of S. cerevisiae are described. (C) 2003 Federation of European Microbiological Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:201 / 223
页数:23
相关论文
共 226 条
[71]  
Groom K R, 1996, Methods Enzymol, V264, P86, DOI 10.1016/S0076-6879(96)64011-7
[72]   A new efficient gene disruption cassette for repeated use in budding yeast [J].
Guldener, U ;
Heck, S ;
Fiedler, T ;
Beinhauer, J ;
Hegemann, JH .
NUCLEIC ACIDS RESEARCH, 1996, 24 (13) :2519-2524
[73]   DEVELOPMENT OF AN INTEGRATIVE DNA TRANSFORMATION SYSTEM FOR THE YEAST CANDIDA-TROPICALIS [J].
HAAS, LOC ;
CREGG, JM ;
GLEESON, MAG .
JOURNAL OF BACTERIOLOGY, 1990, 172 (08) :4571-4577
[74]   Lucky breaks:: analysis of recombination in Saccharomyces [J].
Haber, JE .
MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS, 2000, 451 (1-2) :53-69
[75]   Lack of chromosome territoriality in yeast: Promiscuous rejoining of broken chromosome ends [J].
Haber, JE ;
Leung, WY .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (24) :13949-13954
[76]   BIOCHEMISTRY AND PHYSIOLOGY OF XYLOSE FERMENTATION BY YEASTS [J].
HAHNHAGERDAL, B ;
JEPPSSON, H ;
SKOOG, K ;
PRIOR, BA .
ENZYME AND MICROBIAL TECHNOLOGY, 1994, 16 (11) :933-943
[77]  
Hansen H, 1996, NONCONVENTIONAL YEAS, P293, DOI [10.1007/978-3-642-79856-6_9., DOI 10.1007/978-3-642-79856-6_9]
[78]   Novel and convenient methods for Candida tropicalis gene disruption using a mutated hygromycin B resistance gene [J].
Hara, A ;
Arie, M ;
Kanai, T ;
Matsui, T ;
Matsuda, H ;
Furuhashi, K ;
Ueda, M ;
Tanaka, A .
ARCHIVES OF MICROBIOLOGY, 2001, 176 (05) :364-369
[79]  
HASTINGS PJ, 1993, GENETICS, V135, P973
[80]   COMPLEX-FORMATION IN YEAST DOUBLE-STRAND BREAK REPAIR - PARTICIPATION OF RAD51, RAD52, RAD55, AND RAD57 PROTEINS [J].
HAYS, SL ;
FIRMENICH, AA ;
BERG, P .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (15) :6925-6929