Structure-function relationships for Schizophyllum commune trehalose phosphorylase and their implications for the catalytic mechanism of family GT-4 glycosyltransferases

被引:19
作者
Goedl, Christiane [1 ]
Griessler, Richard [1 ]
Schwarz, Alexandra [1 ]
Nidetzky, Bernd [1 ]
机构
[1] Graz Univ Technol, Inst Biotechnol & Biochem Engn, A-8010 Graz, Austria
基金
奥地利科学基金会;
关键词
alpha-retaining mechanism; glycosyltransferase; fold family GT-B; internal return mechanism; Schizophyllum commune; trehalose phosphorylase;
D O I
10.1042/BJ20060029
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The cDNA encoding trehalose phosphorylase, a family GT-4 glycosyltransferase from the fungus Schizophyllum commune, was isolated and expressed in Escherichia coli to yield functional recombinant protein in its full length of 737 amino acids. Unlike the natural phosphorylase that was previously obtained as a truncated 61 kDa monomer containing one tightly bound Mg2+, the intact enzyme produced in E. coli is a dimer and not associated with metal ions [Eis, Watkins, Prohaska and Nidetzky (2001) Biochem. J. 356, 757-767]. MS analysis of the slow spontaneous conversion of the full-length enzyme into a 61 kDa fragment that is fully active revealed that critical elements of catalysis and specificity of trebalose phosphorylase reside entirely in the C-terminal protein part. Intact and truncated phosphorylases thus show identical inhibition constants for the transition state analogue orthovanadate and alpha,alpha-trehalose (K-i approximate to 1 mu M). Structure-based sequence comparison with retaining glycosyltransferases of fold family GT-B reveals a putative active centre of trehalose phosphorylase, and results of site-directed mutagenesis confirm the predicted crucial role of Asp(379), His(403), Arg(507) and Lys(512) in catalysis and also delineate a function of these residues in determining the large preference of the wild-type enzyme for the phosphorolysis compared with hydrolysis of a,a-trehalose. The pseudo-disaccharide validoxylamine A was identified as a strong inhibitor of trehalose phosphorylase (K-i = 1.7 +/- 0.2 mu M) that displays 350-fold tighter binding to the enzyme-phosphate complex than the non-phosphorolysable substrate analogue alpha,alpha-thio-trehalose. Structural and electronic features of the inhibitor that may be responsible for high-affinity binding and their complementarity to an anticipated glucosyl oxocarbenium ion-like transition state are discussed.
引用
收藏
页码:491 / 500
页数:10
相关论文
共 40 条
[31]   Catalytic mechanism of α-retaining glucosyl transfer by Corynebacterium callunae starch phosphorylase:: the role of histidine-334 examined through kinetic characterization of site-directed mutants [J].
Schwarz, A ;
Pierfederici, FM ;
Nidetzky, B .
BIOCHEMICAL JOURNAL, 2005, 387 :437-445
[32]   SOLVOLYSIS OF D-GLUCOPYRANOSYL DERIVATIVES IN MIXTURES OF ETHANOL AND 2,2,2-TRIFLUOROETHANOL [J].
SINNOTT, ML ;
JENCKS, WP .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1980, 102 (06) :2026-2032
[33]   Glycosidase mechanisms [J].
Vasella, A ;
Davies, GJ ;
Böhm, M .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2002, 6 (05) :619-629
[34]   Two-stage PCR protocol allowing introduction of multiple mutations, deletions and insertions using QuikChange™ site-directed mutagenesis [J].
Wang, WY ;
Malcolm, BA .
BIOTECHNIQUES, 1999, 26 (04) :680-682
[35]   Phosphorylase recognition and phosphorolysis of its oligosaccharide substrate: answers to a long outstanding question [J].
Watson, KA ;
McCleverty, C ;
Geremia, S ;
Cottaz, S ;
Driguez, H ;
Johnson, LN .
EMBO JOURNAL, 1999, 18 (17) :4619-4632
[36]   The crystal structure of Escherichia coli maltodextrin phosphorylase provides an explanation for the activity without control in this basic archetype of a phosphorylase [J].
Watson, KA ;
Schinzel, R ;
Palm, D ;
Johnson, LN .
EMBO JOURNAL, 1997, 16 (01) :1-14
[37]   Homology between O-linked GlcNAc transferases and proteins of the glycogen phosphorylase superfamily [J].
Wrabl, JO ;
Grishin, NV .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 314 (03) :365-374
[38]   The active site of the Escherichia coli glycogen synthase is similar to the active site of retaining GT-B glycosyltransferases [J].
Yep, A ;
Ballicora, MA ;
Preiss, J .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2004, 316 (03) :960-966
[39]   Identification and characterization of a critical region in the glycogen synthase from Escherichia coli [J].
Yep, A ;
Ballicora, MA ;
Sivak, MN ;
Preiss, J .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (09) :8359-8367
[40]   Glycosidase mechanisms: Anatomy of a finely tuned catalyst [J].
Zechel, DL ;
Withers, SG .
ACCOUNTS OF CHEMICAL RESEARCH, 2000, 33 (01) :11-18