Radiogenomics: Creating a link between molecular diagnostics and diagnostic imaging

被引:227
作者
Rutman, Aaron M. [2 ]
Kuo, Michael D. [1 ,2 ]
机构
[1] Univ Calif San Diego, Med Ctr, Ctr Translat Med Syst, San Diego, CA 92103 USA
[2] Univ Calif San Diego, Med Ctr, Dept Radiol, San Diego, CA 92103 USA
关键词
Radiogenomics; Personalized medicine; Diagnostic imaging; GENE-EXPRESSION PATTERNS; GLIOBLASTOMA-MULTIFORME; DRUG RESPONSE; CANCER; PREDICTION; SUBTYPES; PHARMACOGENOMICS; CLASSIFICATION; CHEMOTHERAPY; PORTRAITS;
D O I
10.1016/j.ejrad.2009.01.050
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Studies employing high-throughput biological techniques have recently contributed to an improved characterization of human cancers, allowing for novel sub-classification, better diagnostic accuracy, and more precise prognostication. However, requirement of surgical procurement of tissue among other things limits the clinical application of such methods in everyday patient care. Radiographic imaging is routine in clinical practice but is currently histopathology based. The use of routine radiographic imaging provides a potential platform for linking specific imaging traits with specific gene expression patterns that inform the underlying cellular pathophysiology; imaging features could then serve as molecular surrogates that contribute to the diagnosis, prognosis, and likely gene-expression-associated treatment response of various forms of human cancer. This review focuses on high-throughput methods such as microarray analysis of gene expression, their role in cancer research, and in particular, on novel methods of associating gene expression patterns with radiographic imaging phenotypes, known as "radiogenomics." These findings underline a potential future role of both diagnostic and interventional radiologists in genetic assessment of cancer patients with radiographic imaging studies. (C) 2009 Elsevier Ireland Ltd. All rights reserved.
引用
收藏
页码:232 / 241
页数:10
相关论文
共 43 条
[1]   Genomic-scale gene expression profiling of normal and malignant immune cells [J].
Alizadeh, AA ;
Staudt, LM .
CURRENT OPINION IN IMMUNOLOGY, 2000, 12 (02) :219-225
[2]   Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling [J].
Alizadeh, AA ;
Eisen, MB ;
Davis, RE ;
Ma, C ;
Lossos, IS ;
Rosenwald, A ;
Boldrick, JG ;
Sabet, H ;
Tran, T ;
Yu, X ;
Powell, JI ;
Yang, LM ;
Marti, GE ;
Moore, T ;
Hudson, J ;
Lu, LS ;
Lewis, DB ;
Tibshirani, R ;
Sherlock, G ;
Chan, WC ;
Greiner, TC ;
Weisenburger, DD ;
Armitage, JO ;
Warnke, R ;
Levy, R ;
Wilson, W ;
Grever, MR ;
Byrd, JC ;
Botstein, D ;
Brown, PO ;
Staudt, LM .
NATURE, 2000, 403 (6769) :503-511
[3]   Robustness, scalability, and integration of a wound-response gene expression signature in predicting breast cancer survival [J].
Chang, HY ;
Nuyten, DSA ;
Sneddon, JB ;
Hastie, T ;
Tibshirani, R ;
Sorlie, T ;
Dai, HY ;
He, YDD ;
van't Veer, LJ ;
Bartelink, H ;
van de Rijn, M ;
Brown, PO ;
van de Vijver, MJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (10) :3738-3743
[4]   Gene expression patterns in human liver cancers [J].
Chen, X ;
Cheung, ST ;
So, S ;
Fan, ST ;
Barry, C ;
Higgins, J ;
Lai, KM ;
Ji, JF ;
Dudoit, S ;
Ng, IOL ;
van de Rijn, M ;
Botstein, D ;
Brown, PO .
MOLECULAR BIOLOGY OF THE CELL, 2002, 13 (06) :1929-1939
[5]   Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells [J].
Cheok, MH ;
Yang, WL ;
Pui, CH ;
Downing, JR ;
Cheng, C ;
Naeve, CW ;
Relling, MV ;
Evans, WE .
NATURE GENETICS, 2003, 34 (01) :85-90
[6]   Molecular portraits and the family tree of cancer [J].
Chung, CH ;
Bernard, PS ;
Perou, CM .
NATURE GENETICS, 2002, 32 (Suppl 4) :533-540
[7]   Identification of noninvasive imaging surrogates for brain tumor gene-expression modules [J].
Diehn, Maximilian ;
Nardini, Christine ;
Wang, David S. ;
McGovern, Susan ;
Jayaraman, Mahesh ;
Liang, Yu ;
Alclape, Kenneth ;
Cha, Soonmee ;
Kuo, Michael D. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (13) :5213-5218
[8]   Moving towards individualized medicine with pharmacogenomics [J].
Evans, WE ;
Relling, MV .
NATURE, 2004, 429 (6990) :464-468
[9]   Pharmacogenomics: Translating functional genomics into rational therapeutics [J].
Evans, WE ;
Relling, MV .
SCIENCE, 1999, 286 (5439) :487-491
[10]   Drug therapy - Pharmacogenomics - Drug disposition, drug targets, and side effects [J].
Evans, WE ;
McLeod, HL .
NEW ENGLAND JOURNAL OF MEDICINE, 2003, 348 (06) :538-549