Overview of Electrochemical DNA Biosensors: New Approaches to Detect the Expression of Life

被引:94
作者
Cagnin, Stefano [1 ,2 ]
Caraballo, Marcelo [3 ]
Guiducci, Carlotta [4 ,5 ]
Martini, Paolo [1 ,2 ]
Ross, Marty [3 ]
SantaAna, Mark [3 ]
Danley, David [3 ]
West, Todd [3 ]
Lanfranchi, Gerolamo [1 ,2 ]
机构
[1] Univ Padua, CRIBI Biotechnol Ctr, I-35121 Padua, Italy
[2] Univ Padua, Dept Biol, I-35121 Padua, Italy
[3] CombiMatrix Corp, Mukilteo, WA 98275 USA
[4] Univ Bologna, DEIS, I-40136 Bologna, Italy
[5] Ecole Polytech Fed Lausanne, Inst Bioengn, IBI, CH-1015 Lausanne, Switzerland
关键词
DNA chip; Electrochemical DNA detection; Biosensors; Microarray; SURFACE-PLASMON RESONANCE; GENETICALLY-MODIFIED ORGANISMS; DIFFERENTIAL GENE-EXPRESSION; QUARTZ-CRYSTAL-MICROBALANCE; POLYMERASE-CHAIN-REACTION; LABEL-FREE DETECTION; OLIGONUCLEOTIDE ARRAYS; ELECTRONIC DETECTION; SIGNAL AMPLIFICATION; SENSITIVE DETECTION;
D O I
10.3390/s90403122
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
DNA microarrays are an important tool with a variety of applications in gene expression studies, genotyping, pharmacogenomics, pathogen classification, drug discovery, sequencing and molecular diagnostics. They are having a strong impact in medical diagnostics for cancer, toxicology and infectious disease applications. A series of papers have been published describing DNA biochips as alternative to conventional microarray platforms to facilitate and ameliorate the signal readout. In this review, we will consider the different methods proposed for biochip construction, focusing on electrochemical detection of DNA. We also introduce a novel single-stranded DNA platform performing high-throughput SNP detection and gene expression profiling.
引用
收藏
页码:3122 / 3148
页数:27
相关论文
共 162 条
[81]   Yeast microarrays for genome wide parallel genetic and gene expression analysis [J].
Lashkari, DA ;
DeRisi, JL ;
McCusker, JH ;
Namath, AF ;
Gentile, C ;
Hwang, SY ;
Brown, PO ;
Davis, RW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (24) :13057-13062
[82]   In situ DNA amplification with magnetic primers for the electrochemical detection of food pathogens [J].
Lermo, A. ;
Campoy, S. ;
Barbe, J. ;
Hernandez, S. ;
Alegret, S. ;
Pividori, M. I. .
BIOSENSORS & BIOELECTRONICS, 2007, 22 (9-10) :2010-2017
[83]   Zero-mode waveguides for single-molecule analysis at high concentrations [J].
Levene, MJ ;
Korlach, J ;
Turner, SW ;
Foquet, M ;
Craighead, HG ;
Webb, WW .
SCIENCE, 2003, 299 (5607) :682-686
[84]  
LI W, 2009, ANAL BIOANAL CHEM
[85]   A novel microgravimetric DNA sensor with high sensitivity [J].
Liu, T ;
Tang, J ;
Han, MM ;
Jiang, L .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2003, 304 (01) :98-100
[86]   Expression monitoring by hybridization to high-density oligonucleotide arrays [J].
Lockhart, DJ ;
Dong, HL ;
Byrne, MC ;
Follettie, MT ;
Gallo, MV ;
Chee, MS ;
Mittmann, M ;
Wang, CW ;
Kobayashi, M ;
Horton, H ;
Brown, EL .
NATURE BIOTECHNOLOGY, 1996, 14 (13) :1675-1680
[87]   Identification of Upper Respiratory Tract Pathogens Using Electrochemical Detection on an Oligonucleotide Microarray [J].
Lodes, Michael J. ;
Suciu, Dominic ;
Wilmoth, Jodi L. ;
Ross, Marty ;
Munro, Sandra ;
Dix, Kim ;
Bernards, Karen ;
Stoever, Axel G. ;
Quintana, Miguel ;
Iihoshi, Naomi ;
Lyon, Wanda J. ;
Danley, David L. ;
McShea, Andrew .
PLOS ONE, 2007, 2 (09)
[88]   DNA arrays, electronic noses and tongues, biosensors and receptors for rapid detection of toxigenic fungi and mycotoxins: A review [J].
Logrieco, A ;
Arrigan, DWM ;
Brengel-Pesce, K ;
Siciliano, P ;
Tothill, I .
FOOD ADDITIVES AND CONTAMINANTS PART A-CHEMISTRY ANALYSIS CONTROL EXPOSURE & RISK ASSESSMENT, 2005, 22 (04) :335-344
[89]   Carbon and gold electrodes as electrochemical transducers for DNA hybridisation sensors [J].
Lucarelli, F ;
Marrazza, G ;
Turner, APF ;
Mascini, M .
BIOSENSORS & BIOELECTRONICS, 2004, 19 (06) :515-530
[90]   Differential Gene Expression Profiling of Laryngeal Squamous Cell Carcinoma by Laser Capture Microdissection and Complementary DNA Microarrays [J].
Ma, Li-Juan ;
Li, Wei ;
Zhang, Xin ;
Huang, Dong-Hai ;
Zhang, Hua ;
Xiao, Jian-Yun ;
Tian, Yong-Quan .
ARCHIVES OF MEDICAL RESEARCH, 2009, 40 (02) :114-123