Concordance of hepatitis C virus typing methods based on restriction fragment length polymorphism analysis in 5' noncoding region and NS4 serotyping, but not in core PCR or a line probe assay

被引:18
作者
Navas, S
Castillo, I
Martin, J
Quiroga, JA
Bartolome, J
Carreno, V
机构
[1] FDN JIMENEZ DIAZ,HEPATOL UNIT,E-28040 MADRID,SPAIN
[2] FDN ESTUDIO HEPATITIS VIRALES,MADRID,SPAIN
关键词
D O I
10.1128/JCM.35.1.317-321.1997
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Data from sequence analysis, genotyping by restriction fragment length polymorphism in the 5' noncoding region, and NS4 serotyping of the sera of 20 patients with chronic hepatitis C virus infection have shown 100% concordance, while core-based methods and a line probe assay have shown several missing or wrong results.
引用
收藏
页码:317 / 321
页数:5
相关论文
共 27 条
[1]   DETECTION OF ANTIBODY TO HEPATITIS-C VIRUS IN PROSPECTIVELY FOLLOWED TRANSFUSION RECIPIENTS WITH ACUTE AND CHRONIC NON-A-HEPATITIS, NON-B-HEPATITIS [J].
ALTER, HJ ;
PURCELL, RH ;
SHIH, JW ;
MELPOLDER, JC ;
HOUGHTON, M ;
CHOO, QL ;
KUO, G .
NEW ENGLAND JOURNAL OF MEDICINE, 1989, 321 (22) :1494-1500
[2]  
BUCK J, 1994, P NATL ACAD SCI USA, V91, P8239
[3]   COMPARISON OF SEVERAL PCR PROCEDURES FOR DETECTION OF SERUM HCV-RNA USING DIFFERENT REGIONS OF THE HCV GENOME [J].
CASTILLO, I ;
BARTOLOME, J ;
QUIROGA, JA ;
CARRENO, V .
JOURNAL OF VIROLOGICAL METHODS, 1992, 38 (01) :71-79
[4]   HEPATITIS-C SEROTYPE AND RESPONSE TO INTERFERON THERAPY [J].
CHEMELLO, L ;
ALBERTI, A ;
ROSE, K ;
SIMMONDS, P .
NEW ENGLAND JOURNAL OF MEDICINE, 1994, 330 (02) :143-143
[5]   ISOLATION OF A CDNA CLONE DERIVED FROM A BLOOD-BORNE NON-A, NON-B VIRAL-HEPATITIS GENOME [J].
CHOO, QL ;
KUO, G ;
WEINER, AJ ;
OVERBY, LR ;
BRADLEY, DW ;
HOUGHTON, M .
SCIENCE, 1989, 244 (4902) :359-362
[6]   SURVEY OF MAJOR GENOTYPES AND SUBTYPES OF HEPATITIS-C VIRUS USING RFLP OF SEQUENCES AMPLIFIED FROM THE 5' NONCODING REGION [J].
DAVIDSON, F ;
SIMMONDS, P ;
FERGUSON, JC ;
JARVIS, LM ;
DOW, BC ;
FOLLETT, EAC ;
SEED, CRG ;
KRUSIUS, T ;
LIN, C ;
MEDGYESI, GA ;
KIYOKAWA, H ;
OLIM, G ;
DURAISAMY, G ;
CUYPERS, T ;
SAEED, AA ;
TEO, D ;
CONRADIE, J ;
KEW, MC ;
LIN, M ;
NUCHAPRAYOON, C ;
NDIMBIE, OK ;
YAP, PL .
JOURNAL OF GENERAL VIROLOGY, 1995, 76 :1197-1204
[7]   HEPATITIS-C VIRUS GENOTYPES - AN INVESTIGATION OF TYPE-SPECIFIC DIFFERENCES IN GEOGRAPHIC ORIGIN AND DISEASE [J].
DUSHEIKO, G ;
SCHMILOVITZWEISS, H ;
BROWN, D ;
MCOMISH, F ;
YAP, PL ;
SHERLOCK, S ;
MCINTYRE, N ;
SIMMONDS, P .
HEPATOLOGY, 1994, 19 (01) :13-18
[8]   COMPARATIVE-ANALYSIS OF 2 ASSAYS FOR GENOTYPING HEPATITIS-C VIRUS-BASED ON GENOTYPE-SPECIFIC PRIMERS OR PROBES [J].
GIANNINI, C ;
THIERS, V ;
NOUSBAUM, JB ;
STUYVER, L ;
MAERTENS, G ;
BRECHOT, C .
JOURNAL OF HEPATOLOGY, 1995, 23 (03) :246-253
[9]   GENOTYPES AND TITERS OF HEPATITIS-C VIRUS FOR PREDICTING RESPONSE TO INTERFERON IN PATIENTS WITH CHRONIC HEPATITIS-C [J].
HINO, K ;
SAINOKAMI, S ;
SHIMODA, K ;
IINO, S ;
WANG, Y ;
OKAMOTO, H ;
MIYAKAWA, Y ;
MAYUMI, M .
JOURNAL OF MEDICAL VIROLOGY, 1994, 42 (03) :299-305
[10]   AN ASSAY FOR CIRCULATING ANTIBODIES TO A MAJOR ETIOLOGIC VIRUS OF HUMAN NON-A, NON-B-HEPATITIS [J].
KUO, G ;
CHOO, QL ;
ALTER, HJ ;
GITNICK, GL ;
REDEKER, AG ;
PURCELL, RH ;
MIYAMURA, T ;
DIENSTAG, JL ;
ALTER, MJ ;
STEVENS, CE ;
TEGTMEIER, GE ;
BONINO, F ;
COLOMBO, M ;
LEE, WS ;
KUO, C ;
BERGER, K ;
SHUSTER, JR ;
OVERBY, LR ;
BRADLEY, DW ;
HOUGHTON, M .
SCIENCE, 1989, 244 (4902) :362-364