The promise of structural genomics in the discovery of new antimicrobial agents

被引:11
作者
Buchanan, SG [1 ]
Sauder, JM [1 ]
Harris, T [1 ]
机构
[1] Struct GenomiX, Bioinformat, San Diego, CA 92121 USA
关键词
D O I
10.2174/1381612023394809
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Structural Genomics stands out among the emerging fields of proteomics since it influences the drug discovery process at so many points. Recent developments in protein expression technologies, x-ray crystallography and NMR spectroscopy provide the essential elements for high-throughput structure determination platforms. Bioinformatics methods to interrogate the resulting data will provide comprehensive, genome-wide databases of protein structure. Genomic sequencing and methods for high-throughput expression and protein purification are furthest advanced for microbial genes and so these have been the early targets for structural genomics initiatives. The information will be invaluable in understanding gene function, designing broad-spectrum small molecule inhibitors and in better understanding drug-host interactions.
引用
收藏
页码:1173 / 1188
页数:16
相关论文
共 120 条
[1]   Structure of the S15,S18-rRNA complex: Assembly of the 30S ribosome central domain [J].
Agalarov, SC ;
Prasad, GS ;
Funke, PM ;
Stout, CD ;
Williamson, JR .
SCIENCE, 2000, 288 (5463) :107-112
[2]   Bacterial genome sequencing and drug discovery [J].
Allsop, AE .
CURRENT OPINION IN BIOTECHNOLOGY, 1998, 9 (06) :637-642
[3]   Structure-based design of submicromolar, biologically active inhibitors of trypanosomatid glyceraldehyde-3-phosphate dehydrogenase [J].
Aronov, AM ;
Suresh, S ;
Buckner, FS ;
Van Voorhis, WC ;
Verlinde, CLMJ ;
Opperdoes, FR ;
Hol, WGJ ;
Gelb, MH .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (08) :4273-4278
[4]   How bacteria talk to each other: regulation of gene expression by quorum sensing [J].
Bassler, BL .
CURRENT OPINION IN MICROBIOLOGY, 1999, 2 (06) :582-587
[5]   Implication of tubby proteins as transcription factors by structure-based functional analysis [J].
Boggon, TJ ;
Shan, WS ;
Santagata, S ;
Myers, SC ;
Shapiro, L .
SCIENCE, 1999, 286 (5447) :2119-2125
[6]   Structure/function studies on enzymes in the diaminopimelate pathway of bacterial cell wall biosynthesis [J].
Born, TL ;
Blanchard, JS .
CURRENT OPINION IN CHEMICAL BIOLOGY, 1999, 3 (05) :607-613
[7]   LiveBench-1: Continuous benchmarking of protein structure prediction servers [J].
Bujnicki, JM ;
Elofsson, A ;
Fischer, D ;
Rychlewski, L .
PROTEIN SCIENCE, 2001, 10 (02) :352-361
[8]   An overview of structural genomics [J].
Burley, SK .
NATURE STRUCTURAL BIOLOGY, 2000, 7 (Suppl 11) :932-934
[9]   The structure of UDP-N-acetylglucosamine 2-epimerase reveals homology to phosphoglycosyl transferases [J].
Campbell, RE ;
Mosimann, SC ;
Tanner, ME ;
Strynadka, NCJ .
BIOCHEMISTRY, 2000, 39 (49) :14993-15001
[10]   Crystallization in cubo:: general applicability to membrane proteins [J].
Chiu, ML ;
Nollert, P ;
Loewen, MC ;
Belrhali, H ;
Pebay-Peyroula, E ;
Rosenbusch, JP ;
Landau, EM .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2000, 56 :781-784