microRNA;
trans-acting small RNA;
tasiRNA;
transitivity;
Arabidopsis;
TRANS-ACTING SIRNAS;
ARTIFICIAL MICRORNAS;
SMALL RNAS;
BIOGENESIS;
PLANTS;
MIRNA;
SPECIALIZATION;
PATHWAY;
D O I:
10.1038/embor.2008.247
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
Trans-acting small interfering RNAs (tasiRNAs) comprise a class of endogenous small RNAs that are generated from TAS gene-derived transcripts after these are cleaved at a microRNA ( miRNA) target site. Arabidopsis thaliana has four families of TAS genes: miR173 triggers tasiRNA production from TAS1 and TAS2, miR390 from TAS3 and miR828 from TAS4. The two-hit trigger model postulates that dual target sites in the same transcript are often sufficient to initiate tasiRNA production, but two hits are not always required for tasiRNA formation. Here, we characterize the function of miR173 in the formation of tasiRNAs from TAS1 transcripts, as well as the importance of the TAS1 and TAS3 transcript sequences outside the miRNA-targeting sites for tasiRNA production. We show that tasiRNAs can be produced from heterologous transcripts containing miR173 or miR390 target sites, indicating that these trigger sequences are the only cis sequences essential for tasiRNA formation.
引用
收藏
页码:264 / 270
页数:7
相关论文
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[1]
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机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Howell, Miya D.
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机构:
Fahlgren, Noah
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Chapman, Elisabeth J.
论文数: 0引用数: 0
h-index: 0
机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Chapman, Elisabeth J.
;
Cumbie, Jason S.
论文数: 0引用数: 0
h-index: 0
机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Cumbie, Jason S.
;
Sullivan, Christopher M.
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h-index: 0
机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Sullivan, Christopher M.
;
Givan, Scott A.
论文数: 0引用数: 0
h-index: 0
机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Givan, Scott A.
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Kasschau, Kristin D.
论文数: 0引用数: 0
h-index: 0
机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Kasschau, Kristin D.
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Carrington, James C.
论文数: 0引用数: 0
h-index: 0
机构:
Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USAOregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Mi, Shijun
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Cai, Tao
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Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Cai, Tao
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Hu, Yugang
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h-index: 0
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Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Hu, Yugang
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Chen, Yemiao
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Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Chen, Yemiao
;
Hodges, Emily
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h-index: 0
机构:
Watson Sch Biol Sci, Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
Howard Hughes Med Inst, Cold Spring Harbor, NY 11724 USANatl Inst Biol Sci, Beijing 102206, Peoples R China
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Ni, Fangrui
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h-index: 0
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Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
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Wu, Liang
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Wu, Liang
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Li, Shan
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Li, Shan
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Zhou, Huanyu
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机构:
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Zhou, Huanyu
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Long, Chengzu
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h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Long, Chengzu
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Chen, She
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h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Chen, She
;
Hannon, Gregory J.
论文数: 0引用数: 0
h-index: 0
机构:
Watson Sch Biol Sci, Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
Howard Hughes Med Inst, Cold Spring Harbor, NY 11724 USANatl Inst Biol Sci, Beijing 102206, Peoples R China
Hannon, Gregory J.
;
Qi, Yijun
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Howell, Miya D.
;
论文数: 引用数:
h-index:
机构:
Fahlgren, Noah
;
Chapman, Elisabeth J.
论文数: 0引用数: 0
h-index: 0
机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Chapman, Elisabeth J.
;
Cumbie, Jason S.
论文数: 0引用数: 0
h-index: 0
机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Cumbie, Jason S.
;
Sullivan, Christopher M.
论文数: 0引用数: 0
h-index: 0
机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Sullivan, Christopher M.
;
Givan, Scott A.
论文数: 0引用数: 0
h-index: 0
机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Givan, Scott A.
;
Kasschau, Kristin D.
论文数: 0引用数: 0
h-index: 0
机构:Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
Kasschau, Kristin D.
;
Carrington, James C.
论文数: 0引用数: 0
h-index: 0
机构:
Oregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USAOregon State Univ, Dept Bot & Plant Pathol, Ctr Genome Res & Biocomp, Corvallis, OR 97331 USA
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Mi, Shijun
;
Cai, Tao
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Cai, Tao
;
Hu, Yugang
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Hu, Yugang
;
Chen, Yemiao
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Chen, Yemiao
;
Hodges, Emily
论文数: 0引用数: 0
h-index: 0
机构:
Watson Sch Biol Sci, Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
Howard Hughes Med Inst, Cold Spring Harbor, NY 11724 USANatl Inst Biol Sci, Beijing 102206, Peoples R China
Hodges, Emily
;
Ni, Fangrui
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Ni, Fangrui
;
Wu, Liang
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Wu, Liang
;
Li, Shan
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Li, Shan
;
Zhou, Huanyu
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Zhou, Huanyu
;
Long, Chengzu
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Long, Chengzu
;
Chen, She
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China
Chen, She
;
Hannon, Gregory J.
论文数: 0引用数: 0
h-index: 0
机构:
Watson Sch Biol Sci, Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
Howard Hughes Med Inst, Cold Spring Harbor, NY 11724 USANatl Inst Biol Sci, Beijing 102206, Peoples R China
Hannon, Gregory J.
;
Qi, Yijun
论文数: 0引用数: 0
h-index: 0
机构:
Natl Inst Biol Sci, Beijing 102206, Peoples R ChinaNatl Inst Biol Sci, Beijing 102206, Peoples R China