Triggering the formation of tasiRNAs in Arabidopsis thaliana: the role of microRNA miR173

被引:86
作者
Felippes, Felipe F. [1 ]
Weigel, Detlef [1 ]
机构
[1] Max Planck Inst Dev Biol, Dept Mol Biol, D-72076 Tubingen, Germany
关键词
microRNA; trans-acting small RNA; tasiRNA; transitivity; Arabidopsis; TRANS-ACTING SIRNAS; ARTIFICIAL MICRORNAS; SMALL RNAS; BIOGENESIS; PLANTS; MIRNA; SPECIALIZATION; PATHWAY;
D O I
10.1038/embor.2008.247
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Trans-acting small interfering RNAs (tasiRNAs) comprise a class of endogenous small RNAs that are generated from TAS gene-derived transcripts after these are cleaved at a microRNA ( miRNA) target site. Arabidopsis thaliana has four families of TAS genes: miR173 triggers tasiRNA production from TAS1 and TAS2, miR390 from TAS3 and miR828 from TAS4. The two-hit trigger model postulates that dual target sites in the same transcript are often sufficient to initiate tasiRNA production, but two hits are not always required for tasiRNA formation. Here, we characterize the function of miR173 in the formation of tasiRNAs from TAS1 transcripts, as well as the importance of the TAS1 and TAS3 transcript sequences outside the miRNA-targeting sites for tasiRNA production. We show that tasiRNAs can be produced from heterologous transcripts containing miR173 or miR390 target sites, indicating that these trigger sequences are the only cis sequences essential for tasiRNA formation.
引用
收藏
页码:264 / 270
页数:7
相关论文
共 24 条
[21]   Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs [J].
Vazquez, F ;
Vaucheret, H ;
Rajagopalan, R ;
Lepers, C ;
Gasciolli, V ;
Mallory, AC ;
Hilbert, JL ;
Bartel, DP ;
Crété, P .
MOLECULAR CELL, 2004, 16 (01) :69-79
[22]  
Weigel D., 2002, Arabidopsis: A laboratory manual
[23]   DICER-LIKE 4 functions in trans-acting small interfering RNA biogenesis and vegetative phase change in Arabidopsis thaliana [J].
Xie, ZX ;
Allen, E ;
Wilken, A ;
Carrington, JC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (36) :12984-12989
[24]   A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis [J].
Yoshikawa, M ;
Peragine, A ;
Park, MY ;
Poethig, RS .
GENES & DEVELOPMENT, 2005, 19 (18) :2164-2175