High-throughput method for the production and analysis of large natural product libraries for drug discovery

被引:191
作者
Eldridge, GR [1 ]
Vervoort, HC [1 ]
Lee, CM [1 ]
Cremin, PA [1 ]
Williams, CT [1 ]
Hart, SM [1 ]
Goering, MG [1 ]
O'Neil-Johnson, M [1 ]
Zeng, L [1 ]
机构
[1] Sequoia Sci Inc, San Diego, CA 92121 USA
关键词
D O I
10.1021/ac025534s
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
High-throughput methods were applied to the production, analysis, and characterization of libraries of natural products in order to accelerate the drug discovery process for high-throughput screening in the pharmaceutical and biotechnology industries. Library production integrates automated flash chromatography, solid-phase extraction, filtration, and high-throughput parallel four-channel preparative high-performance liquid chromatography to obtain the libraries in 96- or 384-well plates. libraries consist of purified fractions with approximately one to five compounds per well. libraries are analyzed prior to biological screening by a high-throughput parallel eight-channel liquid chromatography-evaporative light scattering detection-mass spectrometry system to determine the molecular weight, number, and quantity of compounds in a fraction. After biological screening, active fractions are rapidly purified at the microgram level and individual compounds are rescreened for confirmation of activity. Structures of active compounds are elucidated by NMR spectroscopy and mass spectrometry. Utilization of a novel microcoil probe allows NAIR data to be gathered on 50 mug. As a demonstration, a library was made from the stem bark of Taxus brevifolia. Biological screening in the National Cancer Institute's in vitro panel of three cancer cell lines demonstrates that the process enables the discovery of active anticancer compounds not detected in the flash fractions from which the library originates.
引用
收藏
页码:3963 / 3971
页数:9
相关论文
共 35 条
[1]   Walnut polyphenolics inhibit in vitro human plasma and LDL oxidation [J].
Anderson, KJ ;
Teuber, SS ;
Gobeille, A ;
Cremin, P ;
Waterhouse, AL ;
Steinberg, FM .
JOURNAL OF NUTRITION, 2001, 131 (11) :2837-2842
[2]  
CREMIN P, UNPUB ANAL CHEM
[3]  
de Biasi V, 1999, RAPID COMMUN MASS SP, V13, P1165, DOI 10.1002/(SICI)1097-0231(19990630)13:12<1165::AID-RCM638>3.0.CO
[4]  
2-4
[5]   Comprehensive survey of combinatorial library synthesis: 1999 [J].
Dolle, RE .
JOURNAL OF COMBINATORIAL CHEMISTRY, 2000, 2 (05) :383-433
[6]   Comprehensive survey of combinatorial library synthesis: 2000 [J].
Dolle, RE .
JOURNAL OF COMBINATORIAL CHEMISTRY, 2001, 3 (06) :477-517
[7]   Comprehensive survey of chemical libraries yielding enzyme inhibitors, receptor agonists and antagonists, and other biologically active agents: 1992 through 1997 [J].
Dolle, RE .
MOLECULAR DIVERSITY, 1998, 3 (04) :199-233
[8]   Comprehensive survey of combinatorial library synthesis: 1998 [J].
Dolle, RE ;
Nelson, KH .
JOURNAL OF COMBINATORIAL CHEMISTRY, 1999, 1 (04) :235-282
[9]   Comprehensive survey of combinatorial libraries with undisclosed biological, activity: 1992-1997 [J].
Dolle, RE .
MOLECULAR DIVERSITY, 1998, 4 (04) :233-256
[10]   Evaluation of evaporative light-scattering detector for combinatorial library quantitation by reversed phase HPLC [J].
Fang, LL ;
Wan, M ;
Pennacchio, M ;
Pan, JM .
JOURNAL OF COMBINATORIAL CHEMISTRY, 2000, 2 (03) :254-257