Human AML-iPSCs Reacquire Leukemic Properties after Differentiation and Model Clonal Variation of Disease

被引:106
作者
Chao, Mark P. [1 ,2 ]
Gentles, Andrew J. [1 ,3 ]
Chatterjee, Susmita [1 ]
Lan, Feng [1 ]
Reinisch, Andreas [1 ]
Corces, M. Ryan [1 ]
Xavy, Seethu [1 ]
Shen, Jinfeng [1 ]
Haag, Daniel [1 ]
Chanda, Soham [1 ]
Sinha, Rahul [1 ]
Morganti, Rachel M. [1 ]
Nishimura, Toshinobu [1 ]
Ameen, Mohamed [1 ]
Wu, Haodi [1 ]
Wernig, Marius [1 ]
Wu, Joseph C. [1 ,4 ]
Majeti, Ravindra [1 ,2 ]
机构
[1] Stanford Univ, Inst Stem Cell Biol & Regenerat Med, Stanford, CA 94305 USA
[2] Stanford Univ, Dept Med, Div Hematol, Stanford, CA 94305 USA
[3] Stanford Univ, Stanford Ctr Canc Syst Biol, Stanford, CA 94305 USA
[4] Stanford Univ, Stanford Cardiovasc lar Inst, Stanford, CA 94305 USA
关键词
PLURIPOTENT STEM-CELLS; DNA METHYLATION; HEMATOPOIETIC DIFFERENTIATION; RAS PATHWAY; HOX GENES; MUTATIONS; CANCER; GENERATION; EXPRESSION; INDUCTION;
D O I
10.1016/j.stem.2016.11.018
中图分类号
Q813 [细胞工程];
学科分类号
100113 [医学细胞生物学];
摘要
Understanding the relative contributions of genetic and epigenetic abnormalities to acute myeloid leukemia (AML) should assist integrated design of targeted therapies. In this study, we generated induced pluripotent stem cells (iPSCs) from AML patient samples harboring MLL rearrangements and found that they retained leukemic mutations but reset leukemic DNA methylation/gene expression patterns. AML-iPSCs lacked leukemic potential, but when differentiated into hematopoietic cells, they reacquired the ability to give rise to leukemia in vivo and reestablished leukemic DNA methylation/gene expression patterns, including an aberrant MLL signature. Epigenetic reprogramming was therefore not sufficient to eliminate leukemic behavior. This approach also allowed us to study the properties of distinct AML subclones, including differential drug susceptibilities of KRAS mutant and wild-type cells, and predict relapse based on increased cytarabine resistance of a KRAS wild-type subclone. Overall, our findings illustrate the value of AML-iPSCs for investigating the mechanistic basis and clonal properties of human AML.
引用
收藏
页码:329 / +
页数:23
相关论文
共 73 条
[1]
MEIS1 and HOXA7 genes in human acute myeloid leukemia [J].
Afonja, O ;
Smith, JE ;
Cheng, DM ;
Goldenberg, AS ;
Amorosi, E ;
Shimamoto, T ;
Nakamura, S ;
Ohyashiki, K ;
Ohyashiki, J ;
Toyama, K ;
Takeshita, K .
LEUKEMIA RESEARCH, 2000, 24 (10) :849-855
[2]
The role of HOX genes in normal hematopoiesis and acute leukemia [J].
Alharbi, R. A. ;
Pettengell, R. ;
Pandha, H. S. ;
Morgan, R. .
LEUKEMIA, 2013, 27 (05) :1000-1008
[3]
Toward understanding and exploiting tumor heterogeneity [J].
Alizadeh, Ash A. ;
Aranda, Victoria ;
Bardelli, Alberto ;
Blanpain, Cedric ;
Bock, Christoph ;
Borowski, Christine ;
Caldas, Carlos ;
Califano, Andrea ;
Doherty, Michael ;
Elsner, Markus ;
Esteller, Manel ;
Fitzgerald, Rebecca ;
Korbel, Jan O. ;
Lichter, Peter ;
Mason, Christopher E. ;
Navin, Nicholas ;
Pe'er, Dana ;
Polyak, Kornelia ;
Roberts, Charles W. M. ;
Siu, Lillian ;
Snyder, Alexandra ;
Stower, Hannah ;
Swanton, Charles ;
Verhaak, Roel G. W. ;
Zenklusen, Jean C. ;
Zuber, Johannes ;
Zucman-Rossi, Jessica .
NATURE MEDICINE, 2015, 21 (08) :846-853
[4]
Dissecting the role of aberrant DNA methylation in human leukaemia [J].
Amabile, Giovanni ;
Di Ruscio, Annalisa ;
Mueller, Fabian ;
Welner, Robert S. ;
Yang, Henry ;
Ebralidze, Alexander K. ;
Zhang, Hong ;
Levantini, Elena ;
Qi, Lihua ;
Martinelli, Giovanni ;
Brummelkamp, Thijn ;
Le Beau, Michelle M. ;
Figueroa, Maria E. ;
Bock, Christoph ;
Tenen, Daniel G. .
NATURE COMMUNICATIONS, 2015, 6
[5]
[Anonymous], 2012, BLOOD, DOI DOI 10.1182/BLOOD.V120.21.677.677
[6]
Hox genes in hematopoiesis and leukemogenesis [J].
Argiropoulos, B. ;
Humphries, R. K. .
ONCOGENE, 2007, 26 (47) :6766-6776
[7]
FLT3 mutations in childhood acute lymphoblastic leukemia [J].
Armstrong, SA ;
Mabon, ME ;
Silverman, LB ;
Li, AH ;
Gribben, JG ;
Fox, EA ;
Sallan, SE ;
Korsmeyer, SJ .
BLOOD, 2004, 103 (09) :3544-3546
[8]
Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays [J].
Aryee, Martin J. ;
Jaffe, Andrew E. ;
Corrada-Bravo, Hector ;
Ladd-Acosta, Christine ;
Feinberg, Andrew P. ;
Hansen, Kasper D. ;
Irizarry, Rafael A. .
BIOINFORMATICS, 2014, 30 (10) :1363-1369
[9]
MLL-Rearranged Leukemia Is Dependent on Aberrant H3K79 Methylation by DOT1L [J].
Bernt, Kathrin M. ;
Zhu, Nan ;
Sinha, Amit U. ;
Vempati, Sridhar ;
Faber, Joerg ;
Krivtsov, Andrei V. ;
Feng, Zhaohui ;
Punt, Natalie ;
Daigle, Amanda ;
Bullinger, Lars ;
Pollock, Roy M. ;
Richon, Victoria M. ;
Kung, Andrew L. ;
Armstrong, Scott A. .
CANCER CELL, 2011, 20 (01) :66-78
[10]
Preclinical efficacy of MEK inhibition in Nras-mutant AML [J].
Burgess, Michael R. ;
Hwang, Eugene ;
Firestone, Ari J. ;
Huang, Tannie ;
Xu, Jin ;
Zuber, Johannes ;
Bohin, Natacha ;
Wen, Tiffany ;
Kogan, Scott C. ;
Haigis, Kevin M. ;
Sampath, Deepak ;
Lowe, Scott ;
Shannon, Kevin ;
Li, Qing .
BLOOD, 2014, 124 (26) :3947-3955