Trinucleotide repeat polymorphism within exon 5 of the MICA gene (MHC class I chain-related gene A): allele frequency data in the nine population groups Japanese, Northern Han, Hui, Uygur, Kazakhstan, Iranian, Saudi Arabian, Greek and Italian

被引:142
作者
Ota, M
Katsuyama, Y
Mizuki, N
Ando, H
Furihata, K
Ono, S
PivettiPezzi, P
Tabbara, KF
Palimeris, GD
Nikbin, B
Davatchi, F
Chams, H
Geng, Z
Bahram, S
Inoko, H
机构
[1] YOKOHAMA CITY UNIV, SCH MED, DEPT OPHTHALMOL, YOKOHAMA, KANAGAWA 232, JAPAN
[2] SHONAN RED CROSS, CTR BLOOD, ATSUGI, KANAGAWA, JAPAN
[3] SHINSHU UNIV, SCH MED, DEPT LAB MED, MATSUMOTO, NAGANO 390, JAPAN
[4] UNIV ROMA LA SAPIENZA, INST OPHTHALMOL, ROME, ITALY
[5] KING SAUD UNIV, COLL MED, DEPT OPHTHALMOL, RIYADH 11461, SAUDI ARABIA
[6] MD, FICS, FICOPHTH, ATHENS, GREECE
[7] TEHERAN MED UNIV, DEPT IMMUNOL, TEHRAN, IRAN
[8] UNIV TEHRAN MED SCI, RHEUMATOL RES CTR, TEHRAN, IRAN
[9] FARABI EYE HOSP, IRANIAN SOC OPHTHALMOL, TEHRAN, IRAN
[10] FUDAN UNIV, INST GENET, SHANGHAI 200433, PEOPLES R CHINA
[11] BASEL INST IMMUNOL, BASEL, SWITZERLAND
[12] TOKAI UNIV, SCH MED, DEPT GENET INFORMAT, DIV MOL LIFE SCI, ISEHARA, KANAGAWA 25911, JAPAN
来源
TISSUE ANTIGENS | 1997年 / 49卷 / 05期
关键词
gene frequency; MICA gene (MHC class I chain-related gene A); polymorphism of MICA exon 5; population study; STR (short tandem repeat);
D O I
10.1111/j.1399-0039.1997.tb02778.x
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
We recently identified a trinucleotide repeat polymorphism, (GCT)n, within the transmembrane (TM) segment of the human MHC class I MICA gene (MHC class I chain-related gene A). Five distinct alleles (A4, A5, A5.1, A6, A9) corresponding to 4, 5, 5 with one nucleotide insertion, 6 and 9 repetitions, respectively, have been detected in various HLA homozygous B cell lines. Here we present allele frequencies for this trimeric short tandem repeat (STR) in 604 unrelated individuals collected from nine human populations (Japanese, Northern Han, Hui, Uygur, Kazakhstan, Iranian, Saudi Arabian, Greek and Italian) determined using the polymerase chain reaction (PCR) combined with fluorescent-based automated fragment detection technology. All alleles were present in each population, but allelic distributions varied from one population to another. No new alleles (such as A7 or A8) were identified. The evolutionary and structural significance of these data as well as the potential application to forensic medicine is discussed.
引用
收藏
页码:448 / 454
页数:7
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