TM4 microarray software suite

被引：1390

作者：

Saeed, Alexander I. ^{[1
]}

Hagabati, Nirmal K. ^{[1
]}

Braisted, John C. ^{[1
]}

Liang, Wei ^{[1
]}

Sharov, Vasily ^{[1
]}

Howe, Eleanor A. ^{[1
]}

Li, Jianwei ^{[1
]}

Thiagarajan, Mathangi ^{[1
]}

White, Joseph A. ^{[1
]}

Quackenbush, John ^{[1
]}

机构：

[1] Inst Genom Res, Dept Bioinformat, Rockville, MD USA

来源：

DNA MICROARRAYS, PART B: DATABASES AND STATISTICS | 2006年 / 411卷

基金：

美国国家科学基金会;

关键词：

D O I：

10.1016/S0076-6879(06)11009-5

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Powerful specialized software is essential for managing, quantifying, and ultimately deriving scientific insight from results of a microarray experiment. We have developed a suite of software applications, known as TM4, to support such gene expression studies. The suite consists of open-source tools for data management and reporting, image analysis, normalization and pipeline control, and data mining and visualization. An integrated MIAME-compliant MySQL database is included. This chapter describes each component of the suite and includes a sample analysis walk-through.

引用

页码：134 / +

页数：66

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