Topological variation in single-gene phylogenetic trees

被引:36
作者
Castresana, Jose [1 ]
机构
[1] CSIC, Inst Mol Biol Barcelona, Dept Physiol & Mol Biodivers, ES-08034 Barcelona, Spain
关键词
D O I
10.1186/gb-2007-8-6-216
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A recent large-scale phylogenomic study has shown the great degree of topological variation that can be found among eukaryotic phylogenetic trees constructed from single genes, highlighting the problems that can be associated with gene sampling in phylogenetic studies.
引用
收藏
页数:4
相关论文
共 19 条
[1]   Lateral gene transfer and the origins of prokaryotic groups [J].
Boucher, Y ;
Douady, CJ ;
Papke, RT ;
Walsh, DA ;
Boudreau, MER ;
Nesbo, CL ;
Case, RJ ;
Doolittle, WF .
ANNUAL REVIEW OF GENETICS, 2003, 37 :283-328
[2]   Ancient horizontal gene transfer [J].
Brown, JR .
NATURE REVIEWS GENETICS, 2003, 4 (02) :121-132
[3]   A phylogenomic study of human, dog, and mouse [J].
Cannarozzi, Gina ;
Schneider, Adrian ;
Gonnet, Gaston .
PLOS COMPUTATIONAL BIOLOGY, 2007, 3 (01) :9-14
[4]  
Castresana J, 1998, GENETICS, V150, P1115
[5]   Toward automatic reconstruction of a highly resolved tree of life [J].
Ciccarelli, FD ;
Doerks, T ;
von Mering, C ;
Creevey, CJ ;
Snel, B ;
Bork, P .
SCIENCE, 2006, 311 (5765) :1283-1287
[6]  
Dawkins R.Wong., 2005, The ancestor's tale: A pilgrimage to the dawn of evolution
[7]   Phylogenomics and the reconstruction of the tree of life [J].
Delsuc, F ;
Brinkmann, H ;
Philippe, H .
NATURE REVIEWS GENETICS, 2005, 6 (05) :361-375
[8]   Ancient phylogenetic relationships [J].
Gribaldo, S ;
Philippe, H .
THEORETICAL POPULATION BIOLOGY, 2002, 61 (04) :391-408
[9]   The human phylome [J].
Huerta-Cepas, Jaime ;
Dopazo, Hernan ;
Dopazo, Joaquin ;
Gabaldon, Toni .
GENOME BIOLOGY, 2007, 8 (06)
[10]   Phylogenomics: the beginning of incongruence? [J].
Jeffroy, O ;
Brinkmann, H ;
Delsuc, F ;
Philippe, H .
TRENDS IN GENETICS, 2006, 22 (04) :225-231