Strategy to Improve the Quantitative LC-MS Analysis of Molecular Ions Resistant to Gas-Phase Collision Induced Dissociation: Application to Disulfide-Rich Cyclic Peptides

被引:19
作者
Ciccimaro, Eugene [1 ]
Ranasinghe, Asoka [1 ]
D'Arienzo, Celia [1 ]
Xu, Carrie [1 ]
Onorato, Joelle [1 ]
Drexler, Dieter M. [1 ]
Josephs, Jonathan L. [2 ]
Poss, Michael [1 ]
Olah, Timothy [1 ]
机构
[1] Bristol Myers Squibb Co, Princeton, NJ 08543 USA
[2] ThermoFisher Sci, San Jose, CA 95134 USA
关键词
CYSTINE KNOT MOTIF; MASS-SPECTROMETRY; TRIPLE QUADRUPOLE; DRUG DESIGN; QUANTIFICATION; BIOANALYSIS; ACTIVATION; PROTEINS; SPECTRA; TRAP;
D O I
10.1021/ac502678y
中图分类号
O65 [分析化学];
学科分类号
070302 [分析化学];
摘要
Due to observed collision induced dissociation (CID) fragmentation inefficiency, developing sensitive liquid chromatography tandem mass spectrometry (LC-MS/MS) assays for CID resistant compounds is especially challenging. As an alternative to traditional LC-MS/MS, we present here a methodology that preserves the intact analyte ion for quantification by selectively filtering ions while reducing chemical noise. Utilizing a quadrupole-Orbitrap MS, the target ion is selectively isolated while interfering matrix components undergo MS/MS fragmentation by CID, allowing noise-free detection of the analyte's surviving molecular ion. In this manner, CID affords additional selectivity during high resolution accurate mass analysis by elimination of isobaric interferences, a fundamentally different concept than the traditional approach of monitoring a target analyte's unique fragment following CID. This survivor-selected ion monitoring (survivor-SIM) approach has allowed sensitive and specific detection of disulfide-rich cyclic peptides extracted from plasma.
引用
收藏
页码:11523 / 11527
页数:5
相关论文
共 21 条
[1]
Engineering pro-angiogenic peptides using stable, disulfide-rich cyclic scaffolds [J].
Chan, Lai Y. ;
Gunasekera, Sunithi ;
Henriques, Sonia T. ;
Worth, Nathalie F. ;
Le, Sarah-Jane ;
Clark, Richard J. ;
Campbell, Julie H. ;
Craik, David J. ;
Daly, Norelle L. .
BLOOD, 2011, 118 (25) :6709-6717
[2]
Chemistry - Seamless proteins tie up their loose ends [J].
Craik, DJ .
SCIENCE, 2006, 311 (5767) :1563-1564
[3]
The cystine knot motif in toxins and implications for drug design [J].
Craik, DJ ;
Daly, NL ;
Waine, C .
TOXICON, 2001, 39 (01) :43-60
[4]
Improving SRM Assay Development: A Global Comparison between Triple Quadrupole, Ion Trap, and Higher Energy CID Peptide Fragmentation Spectra [J].
de Graaf, Erik L. ;
Altelaar, A. F. Maarten ;
van Breukelen, Bas ;
Mohammed, Shabaz ;
Heck, Albert J. R. .
JOURNAL OF PROTEOME RESEARCH, 2011, 10 (09) :4334-4341
[5]
Ding J, 2013, BIOANALYSIS, V5, P2481, DOI [10.4155/BIO.13.215, 10.4155/bio.13.215]
[6]
Electron transfer dissociation coupled to an Orbitrap analyzer may promise a straightforward and accurate sequencing of disulfide-bridged cyclic peptides: a case study [J].
Duan, Xiaotao ;
Engler, Frank A. ;
Qu, Jun .
JOURNAL OF MASS SPECTROMETRY, 2010, 45 (12) :1477-1482
[7]
Spectral Accuracy of Molecular Ions in an LTQ/Orbitrap Mass Spectrometer and Implications for Elemental Composition Determination [J].
Erve, John C. L. ;
Gu, Ming ;
Wang, Yongdong ;
DeMaio, William ;
Talaat, Rasmy E. .
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2009, 20 (11) :2058-2069
[8]
Targeted Proteomic Quantification on Quadrupole-Orbitrap Mass Spectrometer [J].
Gallien, Sebastien ;
Duriez, Elodie ;
Crone, Catharina ;
Kellmann, Markus ;
Moehring, Thomas ;
Domon, Bruno .
MOLECULAR & CELLULAR PROTEOMICS, 2012, 11 (12) :1709-1723
[9]
In Vivo Activation of the p53 Tumor Suppressor Pathway by an Engineered Cyclotide [J].
Ji, Yanbin ;
Majumder, Subhabrata ;
Millard, Melissa ;
Borra, Radhika ;
Bi, Tao ;
Elnagar, Ahmed Y. ;
Neamati, Nouri ;
Shekhtman, Alexander ;
Camarero, Julio A. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2013, 135 (31) :11623-11633
[10]
Levin ER, 1998, NEW ENGL J MED, V339, P321