Deoxyribozymes: DNA catalysts for bioorganic chemistry

被引:94
作者
Silverman, SK [1 ]
机构
[1] Univ Illinois, Dept Chem, Urbana, IL 61801 USA
关键词
D O I
10.1039/b411910j
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
Deoxyribozymes are DNA molecules with catalytic activity. For historical and practical reasons, essentially all reported deoxyribozymes catalyze reactions of nucleic acid substrates, although this is probably not a fundamental limitation. In vitro selection strategies have been used to identify many deoxyribozymes that catalyze RNA cleavage, RNA and DNA ligation, and a variety of covalent modification reactions of nucleic acid substrates. Many deoxyribozymes are capable of catalysis with substantial rate enhancements reaching up to 10(10)-fold over background, and their very high selectivities would often be difficult or impossible to achieve using traditional organic synthesis approaches. This report summarizes the current utility and potential future applications of deoxyribozymes from the bioorganic chemistry perspective.
引用
收藏
页码:2701 / 2706
页数:6
相关论文
共 57 条
[21]   Combinatorial libraries of transition-metal complexes, catalysts and materials [J].
Francis, MB ;
Jamison, TF ;
Jacobsen, EN .
CURRENT OPINION IN CHEMICAL BIOLOGY, 1998, 2 (03) :422-428
[22]  
Gartner ZJ, 2002, ANGEW CHEM INT EDIT, V41, P1796, DOI 10.1002/1521-3773(20020517)41:10<1796::AID-ANIE1796>3.0.CO
[23]  
2-Z
[24]   Multistep small-molecule synthesis programmed by DNA templates [J].
Gartner, ZJ ;
Kanan, MW ;
Liu, DR .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (35) :10304-10306
[25]   The generality of DNA-templated synthesis as a basis for evolving non-natural small molecules [J].
Gartner, ZJ ;
Liu, DR .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2001, 123 (28) :6961-6963
[26]   Combinatorial compound libraries for drug discovery: An ongoing challenge [J].
Geysen, HM ;
Schoenen, F ;
Wagner, D ;
Wagner, R .
NATURE REVIEWS DRUG DISCOVERY, 2003, 2 (03) :222-230
[27]   TEMPLATE-DIRECTED SYNTHESIS - USE OF A REVERSIBLE-REACTION [J].
GOODWIN, JT ;
LYNN, DG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (23) :9197-9198
[28]   THE RNA MOIETY OF RIBONUCLEASE-P IS THE CATALYTIC SUBUNIT OF THE ENZYME [J].
GUERRIERTAKADA, C ;
GARDINER, K ;
MARSH, T ;
PACE, N ;
ALTMAN, S .
CELL, 1983, 35 (03) :849-857
[29]   DNA display I. Sequence-encoded routing of DNA populations [J].
Halpin, DR ;
Harbury, PB .
PLOS BIOLOGY, 2004, 2 (07) :1015-1021
[30]   DNA display III. Solid-phase organic synthesis on unprotected DNA [J].
Halpin, DR ;
Lee, JA ;
Wrenn, SJ ;
Harbury, PB .
PLOS BIOLOGY, 2004, 2 (07) :1031-1038