Histopathology reveals correlative and unique phenotypes in a high-throughput mouse phenotyping screen

被引:39
作者
Adissu, Hibret A. [1 ,2 ,3 ]
Estabel, Jeanne [4 ]
Sunter, David [4 ]
Tuck, Elizabeth [4 ]
Hooks, Yvette [3 ]
Carragher, Damian M. [4 ]
Clarke, Kay [4 ]
Karp, Natasha A. [4 ]
Newbigging, Susan [1 ,2 ,3 ]
Jones, Nora [1 ]
Morikawa, Lily [1 ,2 ]
White, Jacqueline K. [4 ]
McKerlie, Colin [1 ,2 ,3 ]
机构
[1] Toronto Ctr Phenogen, Ctr Modeling Human Dis, Toronto, ON M5T 3H7, Canada
[2] Hosp Sick Children, Physiol & Expt Med Res Program, Toronto, ON M5G 1X8, Canada
[3] Univ Toronto, Fac Med, Dept Lab Med & Pathobiol, Toronto, ON M5S 1A8, Canada
[4] Wellcome Trust Sanger Inst, Mouse Genet Project, Cambridge CB10, England
基金
英国惠康基金;
关键词
Histopathology; High-throughput phenotyping; Mouse; Pathology; MAMMALIAN GENE-FUNCTION; FUNCTIONAL ANNOTATION; GENOME-WIDE; PATHOLOGY; RESOURCE; ONTOLOGY; GROWTH; MPATH; MICE;
D O I
10.1242/dmm.015263
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The Mouse Genetics Project (MGP) at the Wellcome Trust Sanger Institute aims to generate and phenotype over 800 genetically modified mouse lines over the next 5 years to gain a better understanding of mammalian gene function and provide an invaluable resource to the scientific community for follow-up studies. Phenotyping includes the generation of a standardized biobank of paraffin-embedded tissues for each mouse line, but histopathology is not routinely performed. In collaboration with the Pathology Core of the Centre for Modeling Human Disease (CMHD) we report the utility of histopathology in a high-throughput primary phenotyping screen. Histopathology was assessed in an unbiased selection of 50 mouse lines with (n=30) or without (n=20) clinical phenotypes detected by the standard MGP primary phenotyping screen. Our findings revealed that histopathology added correlating morphological data in 19 of 30 lines (63.3%) in which the primary screen detected a phenotype. In addition, seven of the 50 lines (14%) presented significant histopathology findings that were not associated with or predicted by the standard primary screen. Three of these seven lines had no clinical phenotype detected by the standard primary screen. Incidental and strain-associated background lesions were present in all mutant lines with good concordance to wild-type controls. These findings demonstrate the complementary and unique contribution of histopathology to high-throughput primary phenotyping of mutant mice.
引用
收藏
页码:515 / 524
页数:10
相关论文
共 38 条
[11]  
Doetschman T, 1999, LAB ANIM SCI, V49, P137
[12]   Modern Pathology Methods for Neural Investigations [J].
Hale, Sarah L. ;
Andrews-Jones, Lydia ;
Jordan, William H. ;
Jortner, Bernard S. ;
Boyce, Rogely W. ;
Boyce, John T. ;
Switzer, Robert C., III ;
Butt, Mark T. ;
Garman, Robert H. ;
Jensen, Karl ;
Krinke, Georg ;
Little, Peter B. .
TOXICOLOGIC PATHOLOGY, 2011, 39 (01) :52-57
[13]   The adult mouse anatomical dictionary: a tool for annotating and integrating data [J].
Hayamizu, TF ;
Mangan, M ;
Corradi, JP ;
Kadin, JA ;
Ringwald, M .
GENOME BIOLOGY, 2005, 6 (03)
[14]   Robust and Sensitive Analysis of Mouse Knockout Phenotypes [J].
Karp, Natasha A. ;
Melvin, David ;
Mott, Richard F. .
PLOS ONE, 2012, 7 (12)
[15]   Mouse phenogenomics, toolbox for functional annotation of human genome [J].
Kim, Il Yong ;
Shin, Jae Hoon ;
Seong, Je Kyung .
BMB REPORTS, 2010, 43 (02) :79-90
[16]   Bethesda proposals for classification of nonlymphoid hematopoietic neoplasms in mice [J].
Kogan, SC ;
Ward, JM ;
Anver, MR ;
Berman, JJ ;
Brayton, C ;
Cardiff, RD ;
Carter, JS ;
de Coronado, S ;
Downing, JR ;
Fredrickson, TN ;
Haines, DC ;
Harris, AW ;
Harris, NL ;
Hiai, H ;
Jaffe, ES ;
MacLennan, ICM ;
Pandolfi, PP ;
Pattengale, PK ;
Perkins, AS ;
Simpson, RM ;
Tuttle, MS ;
Wong, JF ;
Morse, HC .
BLOOD, 2002, 100 (01) :238-245
[17]   Targeting of Slc25a21 Is Associated with Orofacial Defects and Otitis Media Due to Disrupted Expression of a Neighbouring Gene [J].
Maguire, Simon ;
Estabel, Jeanne ;
Ingham, Neil ;
Pearson, Selina ;
Ryder, Edward ;
Carragher, Damian M. ;
Walker, Nicolas ;
Bussell, James ;
Chan, Wai-In ;
Keane, Thomas M. ;
Adams, David J. ;
Scudamore, Cheryl L. ;
Lelliott, Christopher J. ;
Ramirez-Solis, Ramiro ;
Karp, Natasha A. ;
Steel, Karen P. ;
White, Jacqueline K. ;
Gerdin, Anna-Karin .
PLOS ONE, 2014, 9 (03)
[18]   Accessing data from the International Mouse Phenotyping Consortium: state of the art and future plans [J].
Mallon, Ann-Marie ;
Iyer, Vivek ;
Melvin, David ;
Morgan, Hugh ;
Parkinson, Helen ;
Brown, Steve D. M. ;
Flicek, Paul ;
Skarnes, William C. .
MAMMALIAN GENOME, 2012, 23 (9-10) :641-652
[19]   The Rd8 Mutation of the Crb1 Gene Is Present in Vendor Lines of C57BL/6N Mice and Embryonic Stem Cells, and Confounds Ocular Induced Mutant Phenotypes [J].
Mattapallil, Mary J. ;
Wawrousek, Eric F. ;
Chan, Chi-Chao ;
Zhao, Hui ;
Roychoudhury, Jayeeta ;
Ferguson, Thomas A. ;
Caspi, Rachel R. .
INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2012, 53 (06) :2921-2927
[20]   The Role of Sphingosine-1-Phosphate Transporter Spns2 in Immune System Function [J].
Nijnik, Anastasia ;
Clare, Simon ;
Hale, Christine ;
Chen, Jing ;
Raisen, Claire ;
Mottram, Lynda ;
Lucas, Mark ;
Estabel, Jeanne ;
Ryder, Edward ;
Adissu, Hibret ;
Adams, Niels C. ;
Ramirez-Solis, Ramiro ;
White, Jacqueline K. ;
Steel, Karen P. ;
Dougan, Gordon ;
Hancock, Robert E. W. .
JOURNAL OF IMMUNOLOGY, 2012, 189 (01) :102-111