The receptor binding protein P2 of PRD1, a virus targeting antibiotic-resistant bacteria, has a novel fold suggesting multiple functions

被引:40
作者
Xu, L
Benson, SD
Butcher, SJ
Bamford, DH
Burnett, RM
机构
[1] Wistar Inst Anat & Biol, Philadelphia, PA 19104 USA
[2] Univ Helsinki, Dept Biosci, Helsinki, Finland
[3] Univ Helsinki, Inst Biotechnol, Helsinki, Finland
关键词
antibiotic resistance; bacteriophage PRD1; receptor binding protein; Tectiviridae; X-ray crystallography;
D O I
10.1016/S0969-2126(03)00023-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Bacteriophage PRD1 is unusual, with an internal lipid membrane, but has striking resemblances to adenovirus that include receptor binding spikes. The PRD1 vertex complex contains P2, a 590 residue monomer that binds to receptors on antibiotic-resistant strains of E coli and so is the functional counterpart to adenovirus fiber. P2 structures from two crystal forms, at 2.2 and 2.4 Angstrom resolution, reveal an elongated club-shaped molecule with a novel beta propeller "head" showing pseudo-6-fold symmetry. An extended loop with another novel fold forms a long "tail" containing a protruding proline-rich "fin." The head and fin structures are well suited to recognition and attachment, and the tail is likely to trigger the processes of vertex disassembly, membrane tube formation, and subsequent DNA injection.
引用
收藏
页码:309 / 322
页数:14
相关论文
共 73 条
[41]   G protein heterodimers: New structures propel new questions [J].
Neer, EJ ;
Smith, TF .
CELL, 1996, 84 (02) :175-178
[42]   CULTURE MEDIUM FOR ENTEROBACTERIA [J].
NEIDHARDT, FC ;
BLOCH, PL ;
SMITH, DF .
JOURNAL OF BACTERIOLOGY, 1974, 119 (03) :736-747
[43]   Exploiting the basis of proline recognition by SH3 and WW domains: Design of n-substituted inhibitors [J].
Nguyen, JT ;
Turck, CW ;
Cohen, FE ;
Zuckermann, RN ;
Lim, WA .
SCIENCE, 1998, 282 (5396) :2088-2092
[44]   PROTEIN FOLDING AND ASSOCIATION - INSIGHTS FROM THE INTERFACIAL AND THERMODYNAMIC PROPERTIES OF HYDROCARBONS [J].
NICHOLLS, A ;
SHARP, KA ;
HONIG, B .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 1991, 11 (04) :281-296
[45]   QUANTITATION OF THE ADSORPTION AND PENETRATION STAGES OF BACTERIOPHAGE PHI-6 INFECTION [J].
OLKKONEN, VM ;
BAMFORD, DH .
VIROLOGY, 1989, 171 (01) :229-238
[46]   CHARACTERISTICS OF PRD1, A PLASMID-DEPENDENT BROAD HOST RANGE DNA BACTERIOPHAGE [J].
OLSEN, RH ;
SIAK, JS ;
GRAY, RH .
JOURNAL OF VIROLOGY, 1974, 14 (03) :689-699
[47]   Processing of X-ray diffraction data collected in oscillation mode [J].
Otwinowski, Z ;
Minor, W .
MACROMOLECULAR CRYSTALLOGRAPHY, PT A, 1997, 276 :307-326
[48]   Protein folds propelled by diversity [J].
Paoli, M .
PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 2001, 76 (1-2) :103-130
[49]   POSITIONALLY INDEPENDENT AND EXCHANGEABLE LATE BUDDING FUNCTIONS OF THE ROUS-SARCOMA VIRUS AND HUMAN-IMMUNODEFICIENCY-VIRUS GAG PROTEINS [J].
PARENT, LJ ;
BENNETT, RP ;
CRAVEN, RC ;
NELLE, TD ;
KRISHNA, NK ;
BOWZARD, JB ;
WILSON, CB ;
PUFFER, BA ;
MONTELARO, RC ;
WILLS, JW .
JOURNAL OF VIROLOGY, 1995, 69 (09) :5455-5460
[50]   Eukaryotic signalling domain homologues in archaea and bacteria. Ancient ancestry and horizontal gene transfer [J].
Ponting, CP ;
Aravind, L ;
Schultz, J ;
Bork, P ;
Koonin, EV .
JOURNAL OF MOLECULAR BIOLOGY, 1999, 289 (04) :729-745