A contiguous 60 kb genomic stretch from barley reveals molecular evidence for gene islands in a monocot genome

被引:106
作者
Panstruga, R [1 ]
Büschges, R [1 ]
Piffanelli, P [1 ]
Schulze-Lefert, P [1 ]
机构
[1] John Innes Inst, Sainsbury Lab, Norwich NR4 7UH, Norfolk, England
关键词
D O I
10.1093/nar/26.4.1056
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The contiguous DNA sequence of a 60 kb genomic interval of barley chromosome 4HL has been assembled, The region harbours a single and novel gypsy-like retrotransposon, designated BAGY-1. Only three genes appear to reside in the genomic stretch, One predicts a plant homologue of ribophorin I, a subunit of the oligosaccharyltransferase-protein complex located in the rough endoplasmatic reticulum, The second is similar to the Drosophila g1 gene encoding a ring finger protein involved in developmental processes, The observed gene density is similar to 5-fold lower than in the best characterized dicot genome of Arabidopsis but 6- to 10-fold higher than expected from an equidistant gene distribution in the complex barley genome, Our data suggest that the 60 kb genomic interval represents part of a gene island, a seemingly distinctive feature of grass genomes.
引用
收藏
页码:1056 / 1062
页数:7
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