BioNetBuilder: automatic integration of biological networks

被引：47

作者：

Avila-Campillo, Iliana

Drew, Kevin

Lin, John

Reiss, David J.

Bonneau, Richard ^{[1
]}

机构：

[1] NYU, Dept Biol, New York, NY 10003 USA

[2] NYU, Courant Inst, Dept Comp Sci, New York, NY USA

[3] Inst Syst Biol, Seattle, WA USA

来源：

BIOINFORMATICS | 2007年 / 23卷 / 03期

关键词：

D O I：

10.1093/bioinformatics/btl604

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

BioNetBuilder is an open-source client-server Cytoscape plugin that offers a user-friendly interface to create biological networks integrated from several databases. Users can create networks for similar to 1500 organisms, including common model organisms and human. Currently supported databases include: DIP, BIND, Prolinks, KEGG, HPRD, The BioGrid and GO, among others. The BioNetBuilder plugin client is available as a Java Webstart, providing a platform-independent network interface to these public databases. Availability: http://err.bio.nyu.edu/cytoscape/bionetbuilder/ Contact: iliana_avila-campillo@merck.com.

引用

页码：392 / 393

页数：2

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