Substitutions at the P1′ position in BPTI strongly affect the association energy with serine proteinases

被引:72
作者
Grzesiak, A
Helland, R
Smalås, AO
Krowarsch, D
Dadlez, M
Otlewski, J
机构
[1] Univ Wroclaw, Inst Biochem & Mol Biol, Prot Engn Lab, PL-50137 Wroclaw, Poland
[2] Univ Tromso, Dept Chem, Prot Crystallog Grp, N-9037 Tromso, Norway
[3] Polish Acad Sci, Inst Biochem & Biophys, PL-02106 Warsaw, Poland
关键词
bovine pancreatic trypsin inhibitor; serine proteinase specificity; trypsin; chymotrypsin; plasmin;
D O I
10.1006/jmbi.2000.3935
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The role of the S-1' subsite in trypsin, chymotrypsin and plasmin has been examined by measuring the association with seven different mutants of bovine pancreatic trypsin inhibitor (BPTI); the mutants contain Gly, Ala, Ser, Val, Leu, Arg, and Trp at the P-1' position of the reactive site. The effects of substitutions at the P-1' position on the association constants are very large, comprising seven orders of magnitude for trypsin and plasmin, and over five orders for chymotrypsin. All mutants showed a decrease of the association constant to the three proteinases in the same order: Ala > Gly > Ser > Arg > Val > Leu > Trp. Calorimetric and circular dichroism methods showed that none of the P1' substitutions, except the P1'-Val mutant, lead to destabilisation of the binding loop conformation. The X-ray structure of the complex formed between bovine beta-trypsin and P-1'-Leu BPTI showed that the P-1'-Leu sterically conflicts with the sidechain of P-3'-Ile, which thereby is forced to rotate approximately 90 degrees. lle18 (P-3') in its new orientation, in turn interacts with the Tyr39 side-chain of trypsin. Introduction of a large side-chain at the P1' position apparently leads to a cascade of small alterations of the trypsin-BPTI interface that seem to destabilise the complex by it adopting a less optimized packing and by tilting the BPTI molecule up to 15 degrees compared to the native trypsin-BPTI complex. (C) 2000 Academic Press.
引用
收藏
页码:205 / 217
页数:13
相关论文
共 53 条
[31]   PROCHECK - A PROGRAM TO CHECK THE STEREOCHEMICAL QUALITY OF PROTEIN STRUCTURES [J].
LASKOWSKI, RA ;
MACARTHUR, MW ;
MOSS, DS ;
THORNTON, JM .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1993, 26 :283-291
[32]   Binding of amino acid side-chains to S-1 cavities of serine proteinases [J].
Lu, WY ;
Apostol, I ;
Qasim, MA ;
Warne, N ;
Wynn, R ;
Zhang, WL ;
Anderson, S ;
Chiang, YW ;
Ogin, E ;
Rothberg, I ;
Ryan, K ;
Laskowski, M .
JOURNAL OF MOLECULAR BIOLOGY, 1997, 266 (02) :441-461
[33]   THERMODYNAMICS OF BPTI FOLDING [J].
MAKHATADZE, GI ;
KIM, KS ;
WOODWARD, C ;
PRIVALOV, PL .
PROTEIN SCIENCE, 1993, 2 (12) :2028-2036
[34]   AMORE - AN AUTOMATED PACKAGE FOR MOLECULAR REPLACEMENT [J].
NAVAZA, J .
ACTA CRYSTALLOGRAPHICA SECTION A, 1994, 50 :157-163
[35]  
NIELSEN KJ, 1994, PROTEIN SCI, V3, P291
[36]   Protein inhibitors of serine proteinases [J].
Otlewski, J ;
Krowarsch, D ;
Apostoluk, W .
ACTA BIOCHIMICA POLONICA, 1999, 46 (03) :531-565
[37]   SINGLE PEPTIDE-BOND HYDROLYSIS RESYNTHESIS IN SQUASH INHIBITORS OF SERINE PROTEINASES .1. KINETICS AND THERMODYNAMICS OF THE INTERACTION BETWEEN SQUASH INHIBITORS AND BOVINE BETA-TRYPSIN [J].
OTLEWSKI, J ;
ZBYRYT, T .
BIOCHEMISTRY, 1994, 33 (01) :200-207
[38]   HOW TO MEASURE AND PREDICT THE MOLAR ABSORPTION-COEFFICIENT OF A PROTEIN [J].
PACE, CN ;
VAJDOS, F ;
FEE, L ;
GRIMSLEY, G ;
GRAY, T .
PROTEIN SCIENCE, 1995, 4 (11) :2411-2423
[39]   Specificity of human cathepsin G [J].
Polanowska, J ;
Krokoszynska, I ;
Czapinska, H ;
Watorek, W ;
Dadlez, M ;
Otlewski, J .
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 1998, 1386 (01) :189-198
[40]  
Qasim MA, 1997, BIOCHEMISTRY-US, V36, P1598, DOI 10.1021/bi9620870