Determination of the structure of Escherichia coli glyoxalase I suggests a structural basis for differential metal activation

被引:118
作者
He, MM
Clugston, SL
Honek, JF
Matthews, BW [1 ]
机构
[1] Univ Oregon, Inst Mol Biol, Howard Hughes Med Inst, Dept Phys, Eugene, OR 97403 USA
[2] Univ Waterloo, Dept Chem, Waterloo, ON N2L 3G1, Canada
关键词
D O I
10.1021/bi000856g
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The metalloenzyme glyoxalase I (GlxI) converts the nonenzymatically produced hemimercaptal of cytotoxic methylglyoxal and glutathione to nontoxic S-D-lactoylglutathione. Human GlxI, for which the structure is known, is active in the presence of Zn2+. Unexpectedly, the Escherichia coli enzyme is inactive in the presence of Zn2+ and is maximally active with Ni2+. To understand this difference in metal. activation and also to obtain a representative of the bacterial enzymes, the structure of E. coli Ni2+-GlxI has been determined. Structures have also been determined for the apo enzyme as well as complexes with Co2+, Cd2+, and Zn2+. It is found that each of the protein-metal complexes that is catalytically active has octahedral geometry. This includes the complexes of the E. coli enzyme with Ni2+, Co2+, and Cd2+, as well as the structures reported for the human Zn2+ enzyme. Conversely, the complex of the E. coli enzyme with Zn2+ has trigonal bipyramidal coordination and is inactive. This mode of coordination includes four protein ligands plus a single water molecule. In contrast, the coordination in the active forms of the enzyme includes two water molecules bound to the metal ion, suggesting that this may be a key feature of the catalytic mechanism. A comparison of the human and E. coli enzymes suggests that there are differences between the active sites that might be exploited for therapeutic use.
引用
收藏
页码:8719 / 8727
页数:9
相关论文
共 59 条
[31]   IMPROVED METHODS FOR BUILDING PROTEIN MODELS IN ELECTRON-DENSITY MAPS AND THE LOCATION OF ERRORS IN THESE MODELS [J].
JONES, TA ;
ZOU, JY ;
COWAN, SW ;
KJELDGAARD, M .
ACTA CRYSTALLOGRAPHICA SECTION A, 1991, 47 :110-119
[32]   Electron-density map interpretation [J].
Jones, TA ;
Kjeldgaard, M .
MACROMOLECULAR CRYSTALLOGRAPHY, PT B, 1997, 277 :173-208
[33]   The extended environment of mononuclear metal centers in protein structures [J].
Karlin, S ;
Zhu, ZY ;
Karlin, KD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (26) :14225-14230
[34]   Mechanism-based competitive inhibitors of glyoxalase I: Intracellular delivery, in vitro antitumor activities, and stabilities in human serum and mouse serum [J].
Kavarana, MJ ;
Kovaleva, EG ;
Creighton, DJ ;
Wollman, MB ;
Eiseman, JL .
JOURNAL OF MEDICINAL CHEMISTRY, 1999, 42 (02) :221-228
[35]  
KISSINGER CR, 1997, EPMR USERS MANUAL
[36]  
Kleywegt GJ., 1994, Proceedings of the CCP4 Study Weekend. From First Map to Final Model, P59
[37]   MOLSCRIPT - A PROGRAM TO PRODUCE BOTH DETAILED AND SCHEMATIC PLOTS OF PROTEIN STRUCTURES [J].
KRAULIS, PJ .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1991, 24 :946-950
[38]   PROCHECK - A PROGRAM TO CHECK THE STEREOCHEMICAL QUALITY OF PROTEIN STRUCTURES [J].
LASKOWSKI, RA ;
MACARTHUR, MW ;
MOSS, DS ;
THORNTON, JM .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1993, 26 :283-291
[39]  
LESLIE AGW, 1999, MOSFLM 6 0 USERS MAN
[40]   Structure/function relationships in nickel metallobiochemistry [J].
Maroney, MJ .
CURRENT OPINION IN CHEMICAL BIOLOGY, 1999, 3 (02) :188-199