QM/MM simulations as an assay for carbapenemase activity in class A β-lactamases

被引:36
作者
Chudyk, Ewa I. [1 ]
Limb, Michael A. L. [1 ]
Jones, Charlotte [1 ]
Spencer, James [2 ]
van der Kamp, Marc W. [1 ]
Mulholland, Adrian J. [1 ]
机构
[1] Univ Bristol, Sch Chem, Ctr Computat Chem, Bristol BS8 1TS, Avon, England
[2] Univ Bristol, Sch Cellular & Mol Med, Bristol BS8 1TD, Avon, England
基金
英国医学研究理事会; 英国工程与自然科学研究理事会; 英国生物技术与生命科学研究理事会; 美国国家卫生研究院;
关键词
ANTIBIOTIC-RESISTANCE; STRUCTURAL BASIS; KPC-2; INHIBITION; MEROPENEM; INSIGHTS; STRAIN; SME-1; SFC-1;
D O I
10.1039/c4cc06495j
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Carbapenems, 'last resort' antibiotics for many bacterial infections, can now be broken down by several class A beta-lactamases (i.e. carbapenemases). Here, carbapenemase activity is predicted through QM/MM dynamics simulations of acyl-enzyme deacylation, requiring only the 3D structure of the apo-enzyme. This may assist in anticipating resistance and future antibiotic design.
引用
收藏
页码:14736 / 14739
页数:4
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