A Review of Imaging Techniques for Plant Phenotyping

被引:718
作者
Li, Lei [1 ,2 ,3 ]
Zhang, Qin [2 ]
Huang, Danfeng [3 ]
机构
[1] Shanghai Jiao Tong Univ, Sch Mech Engn, Shanghai 200240, Peoples R China
[2] Washington State Univ, Ctr Precis & Automated Agr Syst, Prosser, WA 99350 USA
[3] Shanghai Jiao Tong Univ, Sch Agr & Biol, Shanghai 200240, Peoples R China
关键词
phenotyping phenotype; fluorescence imaging; thermal infrared imaging; visible light imaging; imaging spectroscopy; three dimensional imaging; LEAF-AREA INDEX; INFRARED REFLECTANCE SPECTROSCOPY; TIME-OF-FLIGHT; CHLOROPHYLL FLUORESCENCE; ARABIDOPSIS-THALIANA; WATER-CONTENT; MULTISPECTRAL FLUORESCENCE; VEGETATION INDEXES; GENOMIC SELECTION; DROUGHT TOLERANCE;
D O I
10.3390/s141120078
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Given the rapid development of plant genomic technologies, a lack of access to plant phenotyping capabilities limits our ability to dissect the genetics of quantitative traits. Effective, high-throughput phenotyping platforms have recently been developed to solve this problem. In high-throughput phenotyping platforms, a variety of imaging methodologies are being used to collect data for quantitative studies of complex traits related to the growth, yield and adaptation to biotic or abiotic stress (disease, insects, drought and salinity). These imaging techniques include visible imaging (machine vision), imaging spectroscopy (multispectral and hyperspectral remote sensing), thermal infrared imaging, fluorescence imaging, 3D imaging and tomographic imaging (MRT, PET and CT). This paper presents a brief review on these imaging techniques and their applications in plant phenotyping. The features used to apply these imaging techniques to plant phenotyping are described and discussed in this review.
引用
收藏
页码:20078 / 20111
页数:34
相关论文
共 197 条
[31]   Chlorophyll fluorescence imaging for disease-resistance screening of sugar beet [J].
Chaerle, Laury ;
Hagenbeek, Dik ;
De Bruyne, Erik ;
Van Der Straeten, Dominique .
PLANT CELL TISSUE AND ORGAN CULTURE, 2007, 91 (02) :97-106
[32]   Monitoring and screening plant populations with combined thermal and chlorophyll fluorescence imaging [J].
Chaerle, Laury ;
Leinonen, Ilkka ;
Jones, Hamlyn G. ;
Van Der Straeten, Dominique .
JOURNAL OF EXPERIMENTAL BOTANY, 2007, 58 (04) :773-784
[33]   Multicolor fluorescence imaging for early detection of the hypersensitive reaction to tobacco mosaic virus [J].
Chaerle, Laury ;
Lenk, Sandor ;
Hagenbeek, Dik ;
Buschmann, Claus ;
Van Der Straeten, Dominique .
JOURNAL OF PLANT PHYSIOLOGY, 2007, 164 (03) :253-262
[34]  
Chaerle Laury, 2009, Biotechnology Journal, V4, P1152, DOI 10.1002/biot.200800242
[35]   On the use of depth camera for 3D phenotyping of entire plants [J].
Chene, Yann ;
Rousseau, David ;
Lucidarme, Philippe ;
Bertheloot, Jessica ;
Caffier, Valerie ;
Morel, Philippe ;
Belin, Etienne ;
Chapeau-Blondeau, Francois .
COMPUTERS AND ELECTRONICS IN AGRICULTURE, 2012, 82 :122-127
[36]   Spectroscopic determination of leaf water content using continuous wavelet analysis [J].
Cheng, T. ;
Rivard, B. ;
Sanchez-Azofeifa, A. .
REMOTE SENSING OF ENVIRONMENT, 2011, 115 (02) :659-670
[37]   A rice phenomics study-phenotype scoring and seed propagation of a T-DNA insertion-induced rice mutant population [J].
Chern, Chyr-Guan ;
Fan, Ming-Jen ;
Yu, Su-May ;
Hour, Ai-Ling ;
Lu, Po-Chang ;
Lin, Yao-Cheng ;
Wei, Fu-Jin ;
Huang, Sheng-Chung ;
Chen, Shu ;
Lai, Ming-Hsing ;
Tseng, Ching-Shan ;
Yen, Hsing-Mu ;
Jwo, Woei-Shyuan ;
Wu, Chen-Chia ;
Yang, Tung-Lung ;
Li, Lung-Sheng ;
Kuo, Yih-Cheng ;
Li, Su-Mien ;
Li, Charng-Pei ;
Wey, Chiu-Kai ;
Trisiriroj, Arunee ;
Lee, Hsing-Fang ;
Hsing, Yue-Ie C. .
PLANT MOLECULAR BIOLOGY, 2007, 65 (04) :427-438
[38]  
Christophe Reuzeau, 2005, [分子植物育种, Molecular Plant Breeding], V3, P753
[39]   Three-Dimensional Root Phenotyping with a Novel Imaging and Software Platform [J].
Clark, Randy T. ;
MacCurdy, Robert B. ;
Jung, Janelle K. ;
Shaff, Jon E. ;
McCouch, Susan R. ;
Aneshansley, Daniel J. ;
Kochian, Leon V. .
PLANT PHYSIOLOGY, 2011, 156 (02) :455-465
[40]   Monitoring drought effects on vegetation water content and fluxes in chaparral with the 970 nm water band index [J].
Claudio, Helen C. ;
Cheng, Yufu ;
Fuentes, David A. ;
Gamon, John A. ;
Luo, Hongyan ;
Oechel, Walter ;
Qiu, Hong-Lie ;
Rahman, Abdullah F. ;
Sims, Daniel A. .
REMOTE SENSING OF ENVIRONMENT, 2006, 103 (03) :304-311